Query: NC_008710:277207 Borrelia turicatae 91E135, complete genome
Start: 277207, End: 318120, Length: 40914
Host Lineage: Borrelia turicatae; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria
General Information: This strain was isolated in the USA from the soft tick Ornithodoros turicatae. Borrelia turicatae is the causative agent of tick-borne relapsing fever in the southwestern USA. Ticks become infected with Borrelia while feeding on an infected mammal, usually a rodent or squirrel. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the spirochete into a mammalian host through its infectious saliva. Relapsing fever is characterized by period of chills, fever, headache, and malaise, followed by an asymptomatic, followed by another episode of symptoms. The cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010673:291679 | 291679 | 316817 | 25139 | Borrelia hermsii DAH, complete genome | 0 | 8722 | BLASTN svg | BLASTP svg |
NC_015921:272517 | 272517 | 293325 | 20809 | Borrelia bissettii DN127 chromosome, complete genome | 0 | 2085 | BLASTN svg | BLASTP svg |
NC_001318:270488 | 270488 | 294780 | 24293 | Borrelia burgdorferi B31, complete genome | 0 | 1968 | BLASTN svg | BLASTP svg |
NC_006156:271410 | 271410 | 295196 | 23787 | Borrelia garinii PBi chromosome linear, complete sequence | 0 | 1966 | BLASTN svg | BLASTP svg |
NC_008277:272741 | 272741 | 292299 | 19559 | Borrelia afzelii PKo, complete genome | 0 | 1953 | BLASTN svg | BLASTP svg |
NC_015276:2769000 | 2769000 | 2794360 | 25361 | Marinomonas mediterranea MMB-1 chromosome, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_018604:2303239* | 2303239 | 2321886 | 18648 | Brachyspira pilosicoli WesB complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_018607:2184832* | 2184832 | 2203486 | 18655 | Brachyspira pilosicoli B2904 chromosome, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_014330:841841* | 841841 | 864342 | 22502 | Brachyspira pilosicoli 95/1000 chromosome, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_003454:2113464 | 2113464 | 2141450 | 27987 | Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_015638:591964* | 591964 | 611558 | 19595 | Lacinutrix sp. 5H-3-7-4 chromosome, complete genome | 5e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_014652:628435 | 628435 | 654894 | 26460 | Caldicellulosiruptor hydrothermalis 108 chromosome, complete | 8e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_021182:2883716* | 2883716 | 2908567 | 24852 | Clostridium pasteurianum BC1, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_012846:1551000 | 1551000 | 1572442 | 21443 | Bartonella grahamii as4aup, complete genome | 8e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_019908:982471* | 982471 | 1006869 | 24399 | Brachyspira pilosicoli P43/6/78 chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_018604:1045774* | 1045774 | 1069599 | 23826 | Brachyspira pilosicoli WesB complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009802:931129* | 931129 | 954958 | 23830 | Campylobacter concisus 13826, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_014150:2201251* | 2201251 | 2249697 | 48447 | Brachyspira murdochii DSM 12563 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_019978:625476 | 625476 | 645290 | 19815 | Halobacteroides halobius DSM 5150, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014315:226693 | 226693 | 248003 | 21311 | Nitrosococcus watsoni C-113 chromosome, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007484:3231937 | 3231937 | 3250596 | 18660 | Nitrosococcus oceani ATCC 19707, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |