Pre_GI: BLASTN Hits

Some Help

Query: NC_008596:6009511 Mycobacterium smegmatis str. MC2 155, complete genome

Start: 6009511, End: 6053826, Length: 44316

Host Lineage: Mycobacterium smegmatis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causes opportunistic infections. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium smegmatis was initially isolated from human smegma. It is associated with soft tissue lesions following trauma or surgery. It is also reported as a possible factor in penile carcinogenesis.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013235:49387984938798496312324326Nakamurella multipartita DSM 44233, complete genome1e-31147BLASTN svgBLASTP svg
NC_002944:42540114254011427748823478Mycobacterium avium subsp. paratuberculosis K-10, complete genome3e-29139BLASTN svgBLASTP svg
NC_012522:59876445987644601286925226Rhodococcus opacus B4, complete genome1e-28137BLASTN svgBLASTP svg
NC_008268:6149576*6149576617684227267Rhodococcus sp. RHA1, complete genome2e-27133BLASTN svgBLASTP svg
NC_008705:1022252*1022252104828626035Mycobacterium sp. KMS, complete genome7e-24121BLASTN svgBLASTP svg
NC_008146:1016446*1016446104459328148Mycobacterium sp. MCS, complete genome7e-24121BLASTN svgBLASTP svg
NC_005125:48050048050051032729828Gloeobacter violaceus PCC 7421, complete genome1e-19107BLASTN svgBLASTP svg
NC_013757:36897336897341230243330Geodermatophilus obscurus DSM 43160, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015947:56812456812459380225679Burkholderia sp. JV3 chromosome, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_014363:645397*64539768181236416Olsenella uli DSM 7084 chromosome, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_008268:5781604*5781604581424432641Rhodococcus sp. RHA1, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_006087:345976*34597640567959704Leifsonia xyli subsp. xyli str. CTCB07, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_007951:74050074050076287822379Burkholderia xenovorans LB400 chromosome 1, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_008596:421882*42188246586743986Mycobacterium smegmatis str. MC2 155, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_009077:1027357*1027357106455537199Mycobacterium sp. JLS, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_014375:1146328*1146328117709930772Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_015635:51547305154730520644351714Microlunatus phosphovorus NM-1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014158:73344733449383820495Tsukamurella paurometabola DSM 20162 chromosome, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_007677:77116877116883459963432Salinibacter ruber DSM 13855, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_008313:31124403112440314759935160Ralstonia eutropha H16 chromosome 1, complete sequence3e-1075.8BLASTN svgBLASTP svg
NC_007508:4283750*4283750431638632637Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007952:14530001453000147986226863Burkholderia xenovorans LB400 chromosome 2, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_011886:26966712696671271597719307Arthrobacter chlorophenolicus A6, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_019673:8799533*8799533883442634894Saccharothrix espanaensis DSM 44229 complete genome1e-0973.8BLASTN svgBLASTP svg
NC_019940:33417943341794336057818785Thioflavicoccus mobilis 8321 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_003902:71447871447874861534138Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-0869.9BLASTN svgBLASTP svg
NC_006834:78750078750081555228053Xanthomonas oryzae pv. oryzae KACC10331, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007086:42934054293405431133917935Xanthomonas campestris pv. campestris str. 8004, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007705:75594875594878101525068Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010717:4626178*4626178465282826651Xanthomonas oryzae pv. oryzae PXO99A, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008570:3220539*3220539328055660018Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_010125:3467379*3467379349031122933Gluconacetobacter diazotrophicus PAl 5, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_010172:4064087*4064087410309939013Methylobacterium extorquens PA1, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_010397:4150596*4150596418195931364Mycobacterium abscessus chromosome Chromosome, complete sequence8e-0867.9BLASTN svgBLASTP svg
NC_014659:4299552*4299552434331043759Rhodococcus equi 103S, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_018581:11809511180951122156540615Gordonia sp. KTR9 chromosome, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_018750:79136007913600793264719048Streptomyces venezuelae ATCC 10712, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_021064:20852312085231211080625576Propionibacterium avidum 44067, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010551:84695384695386809921147Burkholderia ambifaria MC40-6 chromosome 1, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_007651:16625581662558168442221865Burkholderia thailandensis E264 chromosome I, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_004369:37110937110940147530367Corynebacterium efficiens YS-314, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007005:60567656056765608605229288Pseudomonas syringae pv. syringae B728a, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010622:25761102576110260423628127Burkholderia phymatum STM815 chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_012522:5952307*5952307597971027404Rhodococcus opacus B4, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012791:82137182137185170230332Variovorax paradoxus S110 chromosome 1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_006348:20717492071749209535023602Burkholderia mallei ATCC 23344 chromosome 1, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_006350:31951653195165321400518841Burkholderia pseudomallei K96243 chromosome 1, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_007434:34529853452985347302220038Burkholderia pseudomallei 1710b chromosome I, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_008785:91441191441194029125881Burkholderia mallei SAVP1 chromosome II, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_008836:27803392780339280541925081Burkholderia mallei NCTC 10229 chromosome II, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_009074:30297163029716304855618841Burkholderia pseudomallei 668 chromosome I, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_009076:30451393045139306397918841Burkholderia pseudomallei 1106a chromosome I, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_009080:18157681815768183436818601Burkholderia mallei NCTC 10247 chromosome II, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_013204:23714992371499240814536647Eggerthella lenta DSM 2243, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_015740:45083754508375452814119767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-0661.9BLASTN svgBLASTP svg
NC_001264:28266282666040532140Deinococcus radiodurans R1 chromosome 2, complete sequence5e-0661.9BLASTN svgBLASTP svg