Pre_GI: BLASTN Hits

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Query: NC_008545:115292 Burkholderia cenocepacia HI2424 plasmid 1, complete sequence

Start: 115292, End: 135814, Length: 20523

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008061:21534952153495218337929885Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence015440BLASTN svgBLASTP svg
NC_008543:903129031211009919788Burkholderia cenocepacia HI2424 chromosome 2, complete sequence013740BLASTN svgBLASTP svg
NC_010552:33598933598935658620598Burkholderia ambifaria MC40-6 chromosome 2, complete sequence06799BLASTN svgBLASTP svg
NC_010515:13750911375091141715142061Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence06669BLASTN svgBLASTP svg
NC_010557:67965667965674320963554Burkholderia ambifaria MC40-6 chromosome 3, complete sequence03899BLASTN svgBLASTP svg
NC_008392:10291341029134108217253039Burkholderia cepacia AMMD chromosome 3, complete sequence03875BLASTN svgBLASTP svg
NC_009075:587441*58744162177434334Burkholderia pseudomallei 668 chromosome II, complete sequence0866BLASTN svgBLASTP svg
NC_008390:2156188*2156188218229326106Burkholderia cepacia AMMD chromosome 1, complete sequence6e-146525BLASTN svgBLASTP svg
NC_006351:730007300010112828129Burkholderia pseudomallei K96243 chromosome 2, complete sequence3e-135490BLASTN svgBLASTP svg
NC_009075:922109221012709934890Burkholderia pseudomallei 668 chromosome II, complete sequence2e-130474BLASTN svgBLASTP svg
NC_009074:21175002117500214668929190Burkholderia pseudomallei 668 chromosome I, complete sequence4e-42180BLASTN svgBLASTP svg
NC_004578:47813264781326481642335098Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012791:22330982233098225286719770Variovorax paradoxus S110 chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008391:12104511210451123772327273Burkholderia cepacia AMMD chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_012721:770651*77065183681366163Burkholderia glumae BGR1 chromosome 2, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008060:34185134185136409922249Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence1e-0560BLASTN svgBLASTP svg