Query: NC_008542:197500 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence
Start: 197500, End: 239479, Length: 41980
Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria
General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_008060:3155133* | 3155133 | 3205099 | 49967 | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence | 0 | 11420 | BLASTN svg | BLASTP svg |
NC_015138:693865 | 693865 | 717498 | 23634 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 7e-178 | 632 | BLASTN svg | BLASTP svg |
NC_007651:72952* | 72952 | 145741 | 72790 | Burkholderia thailandensis E264 chromosome I, complete sequence | 3e-63 | 252 | BLASTN svg | BLASTP svg |
NC_007434:3973145 | 3973145 | 4015226 | 42082 | Burkholderia pseudomallei 1710b chromosome I, complete sequence | 2e-60 | 242 | BLASTN svg | BLASTP svg |
NC_007651:3064530* | 3064530 | 3173670 | 109141 | Burkholderia thailandensis E264 chromosome I, complete sequence | 1e-59 | 240 | BLASTN svg | BLASTP svg |
NC_009076:3564500 | 3564500 | 3609731 | 45232 | Burkholderia pseudomallei 1106a chromosome I, complete sequence | 5e-37 | 165 | BLASTN svg | BLASTP svg |
NC_010681:1202929 | 1202929 | 1226526 | 23598 | Burkholderia phytofirmans PsJN chromosome 1, complete sequence | 2e-23 | 119 | BLASTN svg | BLASTP svg |
NC_007347:3612918* | 3612918 | 3637893 | 24976 | Ralstonia eutropha JMP134 chromosome 1, complete sequence | 6e-18 | 101 | BLASTN svg | BLASTP svg |
NC_006350:3957454* | 3957454 | 3982988 | 25535 | Burkholderia pseudomallei K96243 chromosome 1, complete sequence | 9e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_007434:111607* | 111607 | 133924 | 22318 | Burkholderia pseudomallei 1710b chromosome I, complete sequence | 9e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_007651:3719191* | 3719191 | 3741817 | 22627 | Burkholderia thailandensis E264 chromosome I, complete sequence | 9e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_009074:3791232* | 3791232 | 3817841 | 26610 | Burkholderia pseudomallei 668 chromosome I, complete sequence | 9e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_009076:3876733* | 3876733 | 3899761 | 23029 | Burkholderia pseudomallei 1106a chromosome I, complete sequence | 9e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_014722:193500* | 193500 | 215044 | 21545 | Burkholderia rhizoxinica HKI 454, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_012724:147454 | 147454 | 172388 | 24935 | Burkholderia glumae BGR1 chromosome 1, complete genome | 6e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_011901:2983555 | 2983555 | 3002099 | 18545 | Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_018691:3525430* | 3525430 | 3581627 | 56198 | Alcanivorax dieselolei B5 chromosome, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013446:1648556 | 1648556 | 1707681 | 59126 | Comamonas testosteroni CNB-2, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010625:1602191 | 1602191 | 1634391 | 32201 | Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_011770:2499432* | 2499432 | 2556972 | 57541 | Pseudomonas aeruginosa LESB58, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_010338:4108280 | 4108280 | 4138925 | 30646 | Caulobacter sp. K31, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003296:1980687 | 1980687 | 2009018 | 28332 | Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |