Pre_GI: BLASTN Hits

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Query: NC_008542:197500 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 197500, End: 239479, Length: 41980

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008060:3155133*3155133320509949967Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence011420BLASTN svgBLASTP svg
NC_015138:69386569386571749823634Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete7e-178632BLASTN svgBLASTP svg
NC_007651:72952*7295214574172790Burkholderia thailandensis E264 chromosome I, complete sequence3e-63252BLASTN svgBLASTP svg
NC_007434:39731453973145401522642082Burkholderia pseudomallei 1710b chromosome I, complete sequence2e-60242BLASTN svgBLASTP svg
NC_007651:3064530*30645303173670109141Burkholderia thailandensis E264 chromosome I, complete sequence1e-59240BLASTN svgBLASTP svg
NC_009076:35645003564500360973145232Burkholderia pseudomallei 1106a chromosome I, complete sequence5e-37165BLASTN svgBLASTP svg
NC_010681:12029291202929122652623598Burkholderia phytofirmans PsJN chromosome 1, complete sequence2e-23119BLASTN svgBLASTP svg
NC_007347:3612918*3612918363789324976Ralstonia eutropha JMP134 chromosome 1, complete sequence6e-18101BLASTN svgBLASTP svg
NC_006350:3957454*3957454398298825535Burkholderia pseudomallei K96243 chromosome 1, complete sequence9e-1797.6BLASTN svgBLASTP svg
NC_007434:111607*11160713392422318Burkholderia pseudomallei 1710b chromosome I, complete sequence9e-1797.6BLASTN svgBLASTP svg
NC_007651:3719191*3719191374181722627Burkholderia thailandensis E264 chromosome I, complete sequence9e-1797.6BLASTN svgBLASTP svg
NC_009074:3791232*3791232381784126610Burkholderia pseudomallei 668 chromosome I, complete sequence9e-1797.6BLASTN svgBLASTP svg
NC_009076:3876733*3876733389976123029Burkholderia pseudomallei 1106a chromosome I, complete sequence9e-1797.6BLASTN svgBLASTP svg
NC_014722:193500*19350021504421545Burkholderia rhizoxinica HKI 454, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_012724:14745414745417238824935Burkholderia glumae BGR1 chromosome 1, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_011901:29835552983555300209918545Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete3e-1385.7BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013446:16485561648556170768159126Comamonas testosteroni CNB-2, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010625:16021911602191163439132201Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_011770:2499432*2499432255697257541Pseudomonas aeruginosa LESB58, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010338:41082804108280413892530646Caulobacter sp. K31, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_003296:19806871980687200901828332Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete5e-0661.9BLASTN svgBLASTP svg