Pre_GI: BLASTN Hits

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Query: NC_008530:1454118 Lactobacillus gasseri ATCC 33323, complete genome

Start: 1454118, End: 1489742, Length: 35625

Host Lineage: Lactobacillus gasseri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus gasseri ATCC 33323 is a human isolate and is the type strain. This organism has been shown to have probiotic activities such as production of bacteriocins, macrophage stimulation and adherence to intestinal tissues. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus gasseri is a rod-shaped, gram-positive anaerobe. Of the lactobacilli, it is the most amenable to DNA introduction and manipulation which should prove useful in the functional genomic analysis of this species. It has been shown to be an effective probiotic in suppressing Helicobacter pylori infections in humans.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015697:46823446823449009821865Lactobacillus reuteri SD2112 chromosome, complete genome03538BLASTN svgBLASTP svg
NC_015697:50649450649453425327760Lactobacillus reuteri SD2112 chromosome, complete genome02123BLASTN svgBLASTP svg
NC_008497:1575884*1575884159946023577Lactobacillus brevis ATCC 367, complete genome8e-97363BLASTN svgBLASTP svg
NC_013198:1030970*1030970105037019401Lactobacillus rhamnosus GG, complete genome4e-37165BLASTN svgBLASTP svg
NC_010610:16495001649500167265923160Lactobacillus fermentum IFO 3956, complete genome2e-36163BLASTN svgBLASTP svg
NC_010610:11784301178430122897750548Lactobacillus fermentum IFO 3956, complete genome6e-33151BLASTN svgBLASTP svg
NC_014393:47754524775452483914063689Clostridium cellulovorans 743B chromosome, complete genome5e-18101BLASTN svgBLASTP svg
NC_011898:3367457*3367457341359946143Clostridium cellulolyticum H10, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014328:303063*30306337786274800Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015975:92381292381294625822447Lactobacillus ruminis ATCC 27782 chromosome, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_014538:15981061598106162581827713Thermoanaerobacter sp. X513 chromosome, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_018870:2316499*2316499238366067162Thermacetogenium phaeum DSM 12270 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_016023:2163000*2163000219738434385Bacillus coagulans 36D1 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_003909:386880*38688041453927660Bacillus cereus ATCC 10987, complete genome1e-0663.9BLASTN svgBLASTP svg