Query: NC_008530:1454118 Lactobacillus gasseri ATCC 33323, complete genome
Start: 1454118, End: 1489742, Length: 35625
Host Lineage: Lactobacillus gasseri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria
General Information: Lactobacillus gasseri ATCC 33323 is a human isolate and is the type strain. This organism has been shown to have probiotic activities such as production of bacteriocins, macrophage stimulation and adherence to intestinal tissues. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus gasseri is a rod-shaped, gram-positive anaerobe. Of the lactobacilli, it is the most amenable to DNA introduction and manipulation which should prove useful in the functional genomic analysis of this species. It has been shown to be an effective probiotic in suppressing Helicobacter pylori infections in humans.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_015697:468234 | 468234 | 490098 | 21865 | Lactobacillus reuteri SD2112 chromosome, complete genome | 0 | 3538 | BLASTN svg | BLASTP svg |
| NC_015697:506494 | 506494 | 534253 | 27760 | Lactobacillus reuteri SD2112 chromosome, complete genome | 0 | 2123 | BLASTN svg | BLASTP svg |
| NC_008497:1575884* | 1575884 | 1599460 | 23577 | Lactobacillus brevis ATCC 367, complete genome | 8e-97 | 363 | BLASTN svg | BLASTP svg |
| NC_013198:1030970* | 1030970 | 1050370 | 19401 | Lactobacillus rhamnosus GG, complete genome | 4e-37 | 165 | BLASTN svg | BLASTP svg |
| NC_010610:1649500 | 1649500 | 1672659 | 23160 | Lactobacillus fermentum IFO 3956, complete genome | 2e-36 | 163 | BLASTN svg | BLASTP svg |
| NC_010610:1178430 | 1178430 | 1228977 | 50548 | Lactobacillus fermentum IFO 3956, complete genome | 6e-33 | 151 | BLASTN svg | BLASTP svg |
| NC_014393:4775452 | 4775452 | 4839140 | 63689 | Clostridium cellulovorans 743B chromosome, complete genome | 5e-18 | 101 | BLASTN svg | BLASTP svg |
| NC_011898:3367457* | 3367457 | 3413599 | 46143 | Clostridium cellulolyticum H10, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_014328:303063* | 303063 | 377862 | 74800 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_015975:923812 | 923812 | 946258 | 22447 | Lactobacillus ruminis ATCC 27782 chromosome, complete genome | 5e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_014538:1598106 | 1598106 | 1625818 | 27713 | Thermoanaerobacter sp. X513 chromosome, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_018870:2316499* | 2316499 | 2383660 | 67162 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
| NC_016023:2163000* | 2163000 | 2197384 | 34385 | Bacillus coagulans 36D1 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_003909:386880* | 386880 | 414539 | 27660 | Bacillus cereus ATCC 10987, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |