Pre_GI: BLASTN Hits

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Query: NC_008526:565902 Lactobacillus casei ATCC 334, complete genome

Start: 565902, End: 590932, Length: 25031

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010999:62348962348964609722609Lactobacillus casei, complete genome08992BLASTN svgBLASTP svg
NC_008526:23731902373190239665623467Lactobacillus casei ATCC 334, complete genome03120BLASTN svgBLASTP svg
NC_013198:394000*39400046795873959Lactobacillus rhamnosus GG, complete genome02490BLASTN svgBLASTP svg
NC_008525:56100056100058709926100Pediococcus pentosaceus ATCC 25745, complete genome02460BLASTN svgBLASTP svg
NC_008526:50626350626352818721925Lactobacillus casei ATCC 334, complete genome02331BLASTN svgBLASTP svg
NC_008526:19735001973500199344619947Lactobacillus casei ATCC 334, complete genome02087BLASTN svgBLASTP svg
NC_008526:34344534344536727223828Lactobacillus casei ATCC 334, complete genome02068BLASTN svgBLASTP svg
NC_014334:58952658952661259823073Lactobacillus casei str. Zhang chromosome, complete genome02060BLASTN svgBLASTP svg
NC_014334:49330849330851458821281Lactobacillus casei str. Zhang chromosome, complete genome02060BLASTN svgBLASTP svg
NC_014334:36997436997439377323800Lactobacillus casei str. Zhang chromosome, complete genome02060BLASTN svgBLASTP svg
NC_010610:17650001765000179344828449Lactobacillus fermentum IFO 3956, complete genome02028BLASTN svgBLASTP svg
NC_014334:19543331954333198420029868Lactobacillus casei str. Zhang chromosome, complete genome01988BLASTN svgBLASTP svg
NC_010999:56191456191459079528882Lactobacillus casei, complete genome01707BLASTN svgBLASTP svg
NC_010610:755000*75500078559930600Lactobacillus fermentum IFO 3956, complete genome0973BLASTN svgBLASTP svg
NC_015420:35384353846199926616Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, complete0785BLASTN svgBLASTP svg
NC_010610:20136592013659205177738119Lactobacillus fermentum IFO 3956, complete genome7e-149535BLASTN svgBLASTP svg
NC_010999:20597382059738208224722510Lactobacillus casei, complete genome3e-142513BLASTN svgBLASTP svg
NC_010610:79597579597582885432880Lactobacillus fermentum IFO 3956, complete genome9e-130472BLASTN svgBLASTP svg
NC_010999:34925234925236774518494Lactobacillus casei, complete genome8e-81309BLASTN svgBLASTP svg
NC_014727:96677996677998463017852Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,4e-76293BLASTN svgBLASTP svg
NC_007930:21793217934160319811Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,4e-33151BLASTN svgBLASTP svg
NC_013171:342714*34271439927356560Anaerococcus prevotii DSM 20548, complete genome2e-0765.9BLASTN svgBLASTP svg