Pre_GI: BLASTN Hits

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Query: NC_008380:4968492 Rhizobium leguminosarum bv. viciae 3841, complete genome

Start: 4968492, End: 4988099, Length: 19608

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003047:3419212*3419212345066231451Sinorhizobium meliloti 1021, complete genome0644BLASTN svgBLASTP svg
NC_014923:1249267*1249267127291123645Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete1e-103385BLASTN svgBLASTP svg
NC_015857:1809500*1809500183566226163Brucella pinnipedialis B2/94 chromosome chromosome 1, complete3e-58234BLASTN svgBLASTP svg
NC_010742:1794000*1794000181909925100Brucella abortus S19 chromosome 1, complete sequence3e-58234BLASTN svgBLASTP svg
NC_010167:1287000*1287000131378426785Brucella suis ATCC 23445 chromosome II, complete sequence3e-58234BLASTN svgBLASTP svg
NC_010103:1777000*1777000180418827189Brucella canis ATCC 23365 chromosome I, complete sequence3e-58234BLASTN svgBLASTP svg
NC_007618:1792500*1792500182000027501Brucella melitensis biovar Abortus 2308 chromosome I, complete3e-58234BLASTN svgBLASTP svg
NC_006932:1795500*1795500182178126282Brucella abortus biovar 1 str. 9-941 chromosome I, complete3e-58234BLASTN svgBLASTP svg
NC_004310:1777721*1777721180601328293Brucella suis 1330 chromosome I, complete sequence3e-58234BLASTN svgBLASTP svg
NC_009667:1076718*1076718109886222145Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence2e-53218BLASTN svgBLASTP svg
NC_003317:190975*19097521627025296Brucella melitensis 16M chromosome I, complete sequence7e-53216BLASTN svgBLASTP svg
NC_002678:3210751*3210751323209921349Mesorhizobium loti MAFF303099, complete genome2e-31145BLASTN svgBLASTP svg
NC_007925:138927*13892717109932173Rhodopseudomonas palustris BisB18, complete genome8e-28133BLASTN svgBLASTP svg
NC_009720:216589*21658924097524387Xanthobacter autotrophicus Py2, complete genome1e-26129BLASTN svgBLASTP svg
NC_008435:604772*60477264849843727Rhodopseudomonas palustris BisA53, complete genome5e-26127BLASTN svgBLASTP svg
NC_014100:533322*53332256190028579Caulobacter segnis ATCC 21756 chromosome, complete genome7e-25123BLASTN svgBLASTP svg
NC_007404:974461974461101843943979Thiobacillus denitrificans ATCC 25259, complete genome2e-22115BLASTN svgBLASTP svg
NC_002927:4130697*4130697415192921233Bordetella bronchiseptica RB50, complete genome3e-18101BLASTN svgBLASTP svg
NC_002928:3715492*3715492373400118510Bordetella parapertussis 12822, complete genome3e-18101BLASTN svgBLASTP svg
NC_002929:2589202*2589202261209922898Bordetella pertussis Tohama I, complete genome3e-18101BLASTN svgBLASTP svg
NC_003295:2507850*2507850254415436305Ralstonia solanacearum GMI1000, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_010172:280092*28009230984029749Methylobacterium extorquens PA1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010682:2642269*2642269266509922831Ralstonia pickettii 12J chromosome 1, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_010725:356609*35660937730020692Methylobacterium populi BJ001, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011757:276953*27695330159924647Methylobacterium chloromethanicum CM4, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012808:157156*15715618609928944Methylobacterium extorquens AM1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012856:2266187*2266187228576319577Ralstonia pickettii 12D chromosome 1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013446:4281250*4281250430762526376Comamonas testosteroni CNB-2, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_007494:1*12004420044Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_008702:1432952*1432952147997747026Azoarcus sp. BH72, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015422:1116359*1116359114310426746Alicycliphilus denitrificans K601 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014932:1232346*1232346130968277337Bartonella clarridgeiae 73, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008781:3508784*3508784353338924606Polaromonas naphthalenivorans CJ2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012483:30784*307848496154178Acidobacterium capsulatum ATCC 51196, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_014721:2135500*2135500219587560376Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_013209:2032500*2032500205574623247Acetobacter pasteurianus IFO 3283-01, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012034:2555447*2555447258759932153Anaerocellum thermophilum DSM 6725, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013166:1841446*1841446185969318248Kangiella koreensis DSM 16069, complete genome9e-0660BLASTN svgBLASTP svg
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome9e-0660BLASTN svgBLASTP svg