Pre_GI: BLASTN Hits

Some Help

Query: NC_008345:4107847 Shewanella frigidimarina NCIMB 400, complete genome

Start: 4107847, End: 4137958, Length: 30112

Host Lineage: Shewanella frigidimarina; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from the North Sea near Aberdeen, United Kingdom. Iron-reducing marine bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella frigidimarina is an iron-reducing marine bacterium. This organism have been isolated from seawater, sea ice, and marine algae.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008573:19531719531724745052134Shewanella sp. ANA-3 plasmid 1, complete sequence08074BLASTN svgBLASTP svg
NC_018679:24120002412000243472222723Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, complete05812BLASTN svgBLASTP svg
NC_011138:3182807*3182807321165528849Alteromonas macleodii 'Deep ecotype', complete genome05769BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome03874BLASTN svgBLASTP svg
NC_008609:1976403*1976403207096194559Pelobacter propionicus DSM 2379, complete genome03802BLASTN svgBLASTP svg
NC_008740:14149261414926144139326468Marinobacter aquaeolei VT8, complete genome02857BLASTN svgBLASTP svg
NC_008341:29038290385221923182Nitrosomonas eutropha C91 plasmid1, complete sequence02748BLASTN svgBLASTP svg
NC_008344:1364142*1364142138709922958Nitrosomonas eutropha C91, complete genome02748BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete02736BLASTN svgBLASTP svg
NC_003384:10903610903613209923064Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid02736BLASTN svgBLASTP svg
NC_011662:2402408*2402408242621923812Thauera sp. MZ1T, complete genome02728BLASTN svgBLASTP svg
NC_004757:90541790541793018024764Nitrosomonas europaea ATCC 19718, complete genome02642BLASTN svgBLASTP svg
NC_011667:1*11990019900Thauera sp. MZ1T plasmid pTha01, complete sequence02621BLASTN svgBLASTP svg
NC_003384:15715815715818443827281Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid02482BLASTN svgBLASTP svg
NC_009349:78000*7800010171623717Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete02482BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,01842BLASTN svgBLASTP svg
NC_007973:32408663240866326591125046Ralstonia metallidurans CH34 chromosome 1, complete sequence01669BLASTN svgBLASTP svg
NC_014366:58834758834761001621670Gamma proteobacterium HdN1, complete genome01324BLASTN svgBLASTP svg
NC_004349:393839382609922162Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence01201BLASTN svgBLASTP svg
NC_008750:45023345023347009919867Shewanella sp. W3-18-1, complete genome0918BLASTN svgBLASTP svg
NC_009997:2967521*2967521298899221472Shewanella baltica OS195, complete genome0731BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome6e-153549BLASTN svgBLASTP svg
NC_015740:12917391291739131529623558Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-133484BLASTN svgBLASTP svg
NC_011992:22797522279752232691047159Acidovorax ebreus TPSY, complete genome2e-125458BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome2e-115424BLASTN svgBLASTP svg
NC_002488:18126961812696186320850513Xylella fastidiosa 9a5c, complete genome3e-96361BLASTN svgBLASTP svg
NC_004556:10760631076063110003523973Xylella fastidiosa Temecula1, complete genome7e-94353BLASTN svgBLASTP svg
NC_008786:15538331553833157650522673Verminephrobacter eiseniae EF01-2, complete genome1e-86329BLASTN svgBLASTP svg
NC_010801:42190642190645748035575Burkholderia multivorans ATCC 17616 chromosome 3, complete5e-67264BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome7e-66260BLASTN svgBLASTP svg
NC_007274:72979729799468121703Pseudomonas syringae pv. phaseolicola 1448A large plasmid, complete1e-58236BLASTN svgBLASTP svg
NC_008463:12930791293079133019337115Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-50208BLASTN svgBLASTP svg
NC_008782:13080071308007132716219156Acidovorax sp. JS42, complete genome9e-41176BLASTN svgBLASTP svg
NC_008027:55333115533311555523921929Pseudomonas entomophila L48, complete genome9e-41176BLASTN svgBLASTP svg
NC_009512:56325915632591568653153941Pseudomonas putida F1, complete genome8e-32147BLASTN svgBLASTP svg
NC_002927:2636694*2636694265936422671Bordetella bronchiseptica RB50, complete genome8e-32147BLASTN svgBLASTP svg
NC_011662:23749552374955239350718553Thauera sp. MZ1T, complete genome3e-28135BLASTN svgBLASTP svg
NC_021150:18238741823874184285118978Azotobacter vinelandii CA6, complete genome1e-27133BLASTN svgBLASTP svg
NC_012560:18238611823861184283818978Azotobacter vinelandii DJ, complete genome1e-27133BLASTN svgBLASTP svg
NC_010577:10870921087092110992222831Xylella fastidiosa M23, complete genome3e-19105BLASTN svgBLASTP svg
NC_007777:26385802638580267126232683Frankia sp. CcI3, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_009831:3092126*3092126311332621201Shewanella sediminis HAW-EB3, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_014831:18438351843835188451140677Thermaerobacter marianensis DSM 12885 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009138:15183151518315154209923785Herminiimonas arsenicoxydans, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009999:38832388326239723566Shewanella baltica OS195 plasmid pS19502, complete sequence4e-1281.8BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_009052:2683447*2683447270509921653Shewanella baltica OS155, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_006363:36959369596117324215Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_011751:49925004992500501338720888Escherichia coli UMN026 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_009997:39889803988980401023621257Shewanella baltica OS195, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011059:670345*67034569409923755Prosthecochloris aestuarii DSM 271, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_018679:27825027825029659918350Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_009350:698769872583118845Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete1e-0869.9BLASTN svgBLASTP svg
NC_018868:61911361911367007150959Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012968:15949541594954163297838025Methylotenera mobilis JLW8, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012752:111209912099Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmid4e-0661.9BLASTN svgBLASTP svg