Pre_GI: BLASTN Hits

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Query: NC_008345:2717945 Shewanella frigidimarina NCIMB 400, complete genome

Start: 2717945, End: 2741127, Length: 23183

Host Lineage: Shewanella frigidimarina; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from the North Sea near Aberdeen, United Kingdom. Iron-reducing marine bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella frigidimarina is an iron-reducing marine bacterium. This organism have been isolated from seawater, sea ice, and marine algae.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008345:37569773756977377563418658Shewanella frigidimarina NCIMB 400, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009831:44479194447919447190923991Shewanella sediminis HAW-EB3, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008228:20686412068641208901520375Pseudoalteromonas atlantica T6c, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007482:60736560736563471527351Pseudoalteromonas haloplanktis TAC125 chromosome II, complete7e-0763.9BLASTN svgBLASTP svg