Pre_GI Gene

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Host: NC_007482 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007482:607365 Pseudoalteromonas haloplanktis TAC125 chromosome II, complete

Host Lineage: Pseudoalteromonas haloplanktis; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a sample of coastal sea water near a French Antarctic station. This organism is adapted to growth at low temperatures and reactive oxygen species by a number of putative dioxygenases and fatty acid desaturases amongst other proteins. The organism can grow optimally in salt concentrations of 1.5 to 3.5% NaCl.The genome consists of 2 chromosomes, one of which may replicate unidirectionally. Some interesting features of this genome include the lack of the nucleoid-associated gene hns, a lack of genes involved in molybdopterin metabolism, a lack of the cAMP-CAP complex, and a lack of the PEP-dependent PTS system.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6073656084351071ornithine cyclodeaminaseQuickGO ontologyBLASTP
608468609343876hypothetical proteinBLASTP
6094566108621407putative amino acid permeaseQuickGO ontologyBLASTP
6110466120891044hypothetical proteinBLASTP
6122316138471617putative oxygen-dependent membrane associated glycerol-3-phosphate dehydrogenaseQuickGO ontologyBLASTP
613970614866897fructose-bisphosphate aldolaseQuickGO ontologyBLASTP
614978615946969putative fructose-16-bisphosphataseQuickGO ontologyBLASTP
616236616997762transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate DeoR familyQuickGO ontologyBLASTP
6171856186691485putative glycerol kinaseQuickGO ontologyBLASTP
618893619672780putative glycerol diffusion channelQuickGO ontologyBLASTP
619848620411564putative lipoproteinQuickGO ontologyBLASTP
6205506217611212putative site-specific tyrosine integraserecombinase may be used for the termination of replication of chromosome 2QuickGO ontologyBLASTP
6217616229541194putative NaH antiporter may regulate cell volume and cold resistanceQuickGO ontologyBLASTP
6230166260663051putative Fe-S oxidoreductaseQuickGO ontologyBLASTP
6264906288292340phosphoenolpyruvate synthaseQuickGO ontologyBLASTP
629179629988810hypothetical proteinBLASTP
6300716314261356Phospho-2-dehydro-3-deoxyheptonate aldolase Phospho-2-keto-3-deoxyheptonate aldolase DAHP synthetase 3-deoxy-D-arabino-heptulosonate 7-phosphate QuickGO ontologyBLASTP
632567633442876DNA replication terminus site-binding proteinQuickGO ontologyBLASTP
6335016347151215putative replication protein repA-likeQuickGO ontologyBLASTP