Pre_GI: BLASTN Hits

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Query: NC_008278:2972323 Frankia alni ACN14a, complete genome

Start: 2972323, End: 3016173, Length: 43851

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_018681:867230*86723090173034501Nocardia brasiliensis ATCC 700358 chromosome, complete genome2e-45192BLASTN svgBLASTP svg
NC_008595:26872452687245272814940905Mycobacterium avium 104, complete genome1e-22117BLASTN svgBLASTP svg
NC_008278:28825672882567290171919153Frankia alni ACN14a, complete genome2e-18103BLASTN svgBLASTP svg
NC_008278:132000*13200015230120302Frankia alni ACN14a, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015957:32821833282183330581123629Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015312:55790785579078560145622379Pseudonocardia dioxanivorans CB1190 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015434:35070593507059353432627268Verrucosispora maris AB-18-032 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014165:20819142081914210211520202Thermobispora bispora DSM 43833 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg