Pre_GI: BLASTN Hits

Some Help

Query: NC_008278:296526 Frankia alni ACN14a, complete genome

Start: 296526, End: 323027, Length: 26502

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008278:30258993025899304559919701Frankia alni ACN14a, complete genome02089BLASTN svgBLASTP svg
NC_008278:1876435*1876435189875422320Frankia alni ACN14a, complete genome02008BLASTN svgBLASTP svg
NC_007777:49543064954306497563821333Frankia sp. CcI3, complete genome1e-33153BLASTN svgBLASTP svg
NC_018750:43330644333064436046827405Streptomyces venezuelae ATCC 10712, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013522:736339*73633975837722039Thermanaerovibrio acidaminovorans DSM 6589, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013131:2517861*2517861253698619126Catenulispora acidiphila DSM 44928, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007777:24593572459357247973120375Frankia sp. CcI3, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014165:2888961*2888961290818919229Thermobispora bispora DSM 43833 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008609:2446246*2446246249438248137Pelobacter propionicus DSM 2379, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003888:5042283*5042283508756145279Streptomyces coelicolor A3(2), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011992:1505106*1505106152858323478Acidovorax ebreus TPSY, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009049:2131017*2131017216459933583Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg