Query: NC_008278:296526 Frankia alni ACN14a, complete genome
Start: 296526, End: 323027, Length: 26502
Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008278:3025899 | 3025899 | 3045599 | 19701 | Frankia alni ACN14a, complete genome | 0 | 2089 | BLASTN svg | BLASTP svg |
| NC_008278:1876435* | 1876435 | 1898754 | 22320 | Frankia alni ACN14a, complete genome | 0 | 2008 | BLASTN svg | BLASTP svg |
| NC_007777:4954306 | 4954306 | 4975638 | 21333 | Frankia sp. CcI3, complete genome | 1e-33 | 153 | BLASTN svg | BLASTP svg |
| NC_018750:4333064 | 4333064 | 4360468 | 27405 | Streptomyces venezuelae ATCC 10712, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_013522:736339* | 736339 | 758377 | 22039 | Thermanaerovibrio acidaminovorans DSM 6589, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_013131:2517861* | 2517861 | 2536986 | 19126 | Catenulispora acidiphila DSM 44928, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_007777:2459357 | 2459357 | 2479731 | 20375 | Frankia sp. CcI3, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_014165:2888961* | 2888961 | 2908189 | 19229 | Thermobispora bispora DSM 43833 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_008609:2446246* | 2446246 | 2494382 | 48137 | Pelobacter propionicus DSM 2379, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_003888:5042283* | 5042283 | 5087561 | 45279 | Streptomyces coelicolor A3(2), complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_011992:1505106* | 1505106 | 1528583 | 23478 | Acidovorax ebreus TPSY, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_009049:2131017* | 2131017 | 2164599 | 33583 | Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |