Pre_GI: BLASTN Hits

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Query: NC_007948:4176579 Polaromonas sp. JS666, complete genome

Start: 4176579, End: 4204904, Length: 28326

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011662:12116601211660123662824969Thauera sp. MZ1T, complete genome4e-129470BLASTN svgBLASTP svg
NC_006513:34865583486558351342826871Azoarcus sp. EbN1, complete genome1e-122448BLASTN svgBLASTP svg
NC_011992:57100057100058859917600Acidovorax ebreus TPSY, complete genome1e-79305BLASTN svgBLASTP svg
NC_008781:36889653688965371374824784Polaromonas naphthalenivorans CJ2, complete genome2e-72281BLASTN svgBLASTP svg
NC_012791:82137182137185170230332Variovorax paradoxus S110 chromosome 1, complete genome1e-48202BLASTN svgBLASTP svg
NC_014323:4792048*4792048483609944052Herbaspirillum seropedicae SmR1 chromosome, complete genome6e-48200BLASTN svgBLASTP svg
NC_004757:24519192451919247341121493Nitrosomonas europaea ATCC 19718, complete genome1e-42182BLASTN svgBLASTP svg
NC_008752:45891194589119461454025422Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-42182BLASTN svgBLASTP svg
NC_015563:58437035843703587042126719Delftia sp. Cs1-4 chromosome, complete genome5e-33151BLASTN svgBLASTP svg
NC_014931:5088125*5088125512272134597Variovorax paradoxus EPS chromosome, complete genome2e-29139BLASTN svgBLASTP svg
NC_010524:33910753391075341365222578Leptothrix cholodnii SP-6, complete genome7e-29137BLASTN svgBLASTP svg
NC_019902:626934*62693464909922166Thioalkalivibrio nitratireducens DSM 14787, complete genome1e-27133BLASTN svgBLASTP svg
NC_008782:31674403167440322216554726Acidovorax sp. JS42, complete genome2e-23119BLASTN svgBLASTP svg
NC_014910:75519275519280336548174Alicycliphilus denitrificans BC chromosome, complete genome7e-23117BLASTN svgBLASTP svg
NC_015422:70450070450075861254113Alicycliphilus denitrificans K601 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_015677:89667389667391821221540Ramlibacter tataouinensis TTB310 chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NC_002928:12312612312616356640441Bordetella parapertussis 12822, complete genome6e-20107BLASTN svgBLASTP svg
NC_007973:29520042952004297379621793Ralstonia metallidurans CH34 chromosome 1, complete sequence2e-19105BLASTN svgBLASTP svg
NC_018691:1864796*1864796190445339658Alcanivorax dieselolei B5 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_002927:11898211898216220243221Bordetella bronchiseptica RB50, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_014733:107394*10739413952432131Methylovorus sp. MP688 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_002932:22166122166124321221552Chlorobium tepidum TLS, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_008609:3732192*3732192377050638315Pelobacter propionicus DSM 2379, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_007759:41545641545644297727522Syntrophus aciditrophicus SB, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_018868:19605421960542201659956058Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010688:2781624*2781624283409952476Xanthomonas campestris pv. campestris, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_007404:1964935*1964935200068635752Thiobacillus denitrificans ATCC 25259, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007517:24515472451547247982428278Geobacter metallireducens GS-15, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_012791:20529232052923208497632054Variovorax paradoxus S110 chromosome 1, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_003902:71447871447874861534138Xanthomonas campestris pv. campestris str. ATCC 33913, complete4e-1281.8BLASTN svgBLASTP svg
NC_012526:24313882431388245171520328Deinococcus deserti VCD115, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011891:49319614931961494959917639Anaeromyxobacter dehalogenans 2CP-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008260:10154471015447103954324097Alcanivorax borkumensis SK2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013889:1623697*1623697165176828072Thioalkalivibrio sp. K90mix chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_012559:2663747*2663747271401150265Laribacter hongkongensis HLHK9, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008781:33029343302934332709924166Polaromonas naphthalenivorans CJ2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008027:1559083*1559083158236923287Pseudomonas entomophila L48, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_002939:21246422124642215969735056Geobacter sulfurreducens PCA, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_006834:78750078750081555228053Xanthomonas oryzae pv. oryzae KACC10331, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007705:75594875594878101525068Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010551:84695384695386809921147Burkholderia ambifaria MC40-6 chromosome 1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_015740:25873232587323260752820206Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-0971.9BLASTN svgBLASTP svg
NC_011770:2046490*2046490207050324014Pseudomonas aeruginosa LESB58, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010170:50877425087742511517327432Bordetella petrii, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_006513:88112088112091309931980Azoarcus sp. EbN1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005966:69689696899119521507Acinetobacter sp. ADP1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002977:11984381198438121974121304Methylococcus capsulatus str. Bath, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007645:2779381*2779381283209952719Hahella chejuensis KCTC 2396, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015138:10160001016000103760521606Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_014974:246404*24640427108924686Thermus scotoductus SA-01 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_011145:49609404960940498025219313Anaeromyxobacter sp. K, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009937:53082530827690623825Azorhizobium caulinodans ORS 571, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007651:16625581662558168442221865Burkholderia thailandensis E264 chromosome I, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_007348:21151522115152216024045089Ralstonia eutropha JMP134 chromosome 2, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_010995:40839604083960410912825169Cellvibrio japonicus Ueda107, complete genome3e-0661.9BLASTN svgBLASTP svg