Query: NC_007946:3811082 Escherichia coli UTI89, complete genome
Start: 3811082, End: 3835664, Length: 24583
Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: This strain (UTI89) is a uropathogenic strain isolated from a woman with uncomplicated cystitis (bladder inflammation) that has been demonstrated to cause cystitis in a murine urinary tract infection model. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008563:3843859 | 3843859 | 3868448 | 24590 | Escherichia coli APEC O1, complete genome | 0 | 27660 | BLASTN svg | BLASTP svg |
NC_004431:3986472 | 3986472 | 4009487 | 23016 | Escherichia coli CFT073, complete genome | 0 | 27470 | BLASTN svg | BLASTP svg |
NC_008253:3666387 | 3666387 | 3689401 | 23015 | Escherichia coli 536, complete genome | 0 | 27350 | BLASTN svg | BLASTP svg |
NC_011751:3984236 | 3984236 | 4008416 | 24181 | Escherichia coli UMN026 chromosome, complete genome | 0 | 17260 | BLASTN svg | BLASTP svg |
NC_011740:3453455 | 3453455 | 3480565 | 27111 | Escherichia fergusonii ATCC 35469, complete genome | 0 | 8149 | BLASTN svg | BLASTP svg |
NC_010658:3622610 | 3622610 | 3641330 | 18721 | Shigella boydii CDC 3083-94, complete genome | 0 | 4345 | BLASTN svg | BLASTP svg |
NC_015968:4389871 | 4389871 | 4415160 | 25290 | Enterobacter asburiae LF7a chromosome, complete genome | 0 | 2115 | BLASTN svg | BLASTP svg |
NC_012214:3750649 | 3750649 | 3777875 | 27227 | Erwinia pyrifoliae Ep1/96, complete genome | 1e-82 | 315 | BLASTN svg | BLASTP svg |
NC_012779:3570720* | 3570720 | 3594099 | 23380 | Edwardsiella ictaluri 93-146, complete genome | 1e-33 | 153 | BLASTN svg | BLASTP svg |
NC_012912:242709 | 242709 | 271487 | 28779 | Dickeya zeae Ech1591, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_007492:2203220* | 2203220 | 2224173 | 20954 | Pseudomonas fluorescens PfO-1, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007626:2283793* | 2283793 | 2306599 | 22807 | Magnetospirillum magneticum AMB-1, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_010688:149161 | 149161 | 178201 | 29041 | Xanthomonas campestris pv. campestris, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |