Pre_GI: BLASTN Hits

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Query: NC_007880:1780702 Francisella tularensis subsp. holarctica, complete genome

Start: 1780702, End: 1805781, Length: 25080

Host Lineage: Francisella tularensis; Francisella; Francisellaceae; Thiotrichales; Proteobacteria; Bacteria

General Information: This strain (live vaccine strain) was created in the 1960's in the USA and provides protection against tularemia in animal models as well as in humans. Causative agent of tularemia. This organism was first identified by Edward Francis as the causative agent of a plague-like illness that affected squirrels in Tulare county in California in the early part of the 20th century. The organism now bears his name. The disease, which has been noted throughout recorded history, can be transmitted to humans by infected ticks or deerflies, infected meat, or by aerosol, and thus is a potential bioterrorism agent. This organism has a high infectivity rate, and can invade phagocytic and nonphagocytic cells, multiplying rapidly. Once within a macrophage, the organism can escape the phagosome and live in the cytosol. It is an aquatic organism, and can be found living inside protozoans, similar to what is observed with Legionella.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009749:17766001776600179534218743Francisella tularensis subsp. holarctica FTA, complete genome033520BLASTN svgBLASTP svg
NC_008369:17809451780945180541524471Francisella tularensis subsp. holarctica OSU18, complete genome032440BLASTN svgBLASTP svg
NC_008245:17946291794629181759922971Francisella tularensis subsp. tularensis FSC 198, complete genome012500BLASTN svgBLASTP svg
NC_006570:17948321794832181779222961Francisella tularensis subsp. tularensis Schu 4, complete genome012500BLASTN svgBLASTP svg
NC_010677:17840001784000180493420935Francisella tularensis subsp. mediasiatica FSC147, complete genome012450BLASTN svgBLASTP svg
NC_008601:18113271811327183241021084Francisella tularensis subsp. novicida U112, complete genome010530BLASTN svgBLASTP svg
NC_015696:48625048625050481218563Francisella sp. TX077308 chromosome, complete genome05442BLASTN svgBLASTP svg
NC_008369:55794155794158069322753Francisella tularensis subsp. holarctica OSU18, complete genome01705BLASTN svgBLASTP svg
NC_010677:707881*70788173076722887Francisella tularensis subsp. mediasiatica FSC147, complete genome01574BLASTN svgBLASTP svg
NC_010677:1621500*1621500165903737538Francisella tularensis subsp. mediasiatica FSC147, complete genome01560BLASTN svgBLASTP svg
NC_008601:1733940*1733940179060556666Francisella tularensis subsp. novicida U112, complete genome01443BLASTN svgBLASTP svg
NC_007880:221674*22167425368932016Francisella tularensis subsp. holarctica, complete genome0981BLASTN svgBLASTP svg
NC_009749:221311*22131125459933289Francisella tularensis subsp. holarctica FTA, complete genome0973BLASTN svgBLASTP svg
NC_008369:221382*22138225459933218Francisella tularensis subsp. holarctica OSU18, complete genome0965BLASTN svgBLASTP svg
NC_008245:324926*32492635809933174Francisella tularensis subsp. tularensis FSC 198, complete genome0839BLASTN svgBLASTP svg
NC_006570:324974*32497435814633173Francisella tularensis subsp. tularensis Schu 4, complete genome0839BLASTN svgBLASTP svg
NC_014829:44350044350047084427345Bacillus cellulosilyticus DSM 2522 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_014914:13272451327245135092223678Taylorella equigenitalis MCE9 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006370:768745*76874579247423730Photobacterium profundum SS9 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg