Pre_GI: BLASTN Hits

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Query: NC_007778:2875973 Rhodopseudomonas palustris HaA2, complete genome

Start: 2875973, End: 2898997, Length: 23025

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011004:35820783582078360279020713Rhodopseudomonas palustris TIE-1, complete genome1e-97365BLASTN svgBLASTP svg
NC_008435:2658986*2658986275828699301Rhodopseudomonas palustris BisA53, complete genome2e-93351BLASTN svgBLASTP svg
NC_011004:2507566*2507566253137523810Rhodopseudomonas palustris TIE-1, complete genome8e-56226BLASTN svgBLASTP svg
NC_007958:2423335*2423335244565022316Rhodopseudomonas palustris BisB5, complete genome8e-56226BLASTN svgBLASTP svg
NC_009720:3281000*3281000330704926050Xanthobacter autotrophicus Py2, complete genome2e-50208BLASTN svgBLASTP svg
NC_008758:143907*14390718499941093Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, complete1e-42182BLASTN svgBLASTP svg
NC_015410:3502099*3502099352815926061Pseudomonas mendocina NK-01 chromosome, complete genome6e-35157BLASTN svgBLASTP svg
NC_009512:31189073118907313838119475Pseudomonas putida F1, complete genome2e-25125BLASTN svgBLASTP svg
NC_013716:37084153708415373077822364Citrobacter rodentium ICC168, complete genome5e-23117BLASTN svgBLASTP svg
NC_005773:69499069499072559930610Pseudomonas syringae pv. phaseolicola 1448A, complete genome5e-20107BLASTN svgBLASTP svg
NC_013421:20040882004088202439520308Pectobacterium wasabiae WPP163, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015061:12519051251905128092529021Rahnella sp. Y9602 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_004463:1520303*1520303154802027718Bradyrhizobium japonicum USDA 110, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011740:29865142986514300959323080Escherichia fergusonii ATCC 35469, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009075:3113393*3113393313999926607Burkholderia pseudomallei 668 chromosome II, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_008784:1151305*1151305117501923715Burkholderia mallei SAVP1 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_005296:45742134574213461698142769Rhodopseudomonas palustris CGA009, complete genome3e-0661.9BLASTN svgBLASTP svg