Query: NC_007492:3801237 Pseudomonas fluorescens PfO-1, complete genome
Start: 3801237, End: 3819786, Length: 18550
Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_015379:3175500 | 3175500 | 3193475 | 17976 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 0 | 914 | BLASTN svg | BLASTP svg |
NC_004578:3921199 | 3921199 | 3944215 | 23017 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 4e-91 | 343 | BLASTN svg | BLASTP svg |
NC_020209:2119845* | 2119845 | 2144574 | 24730 | Pseudomonas poae RE*1-1-14, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_008321:3964414 | 3964414 | 3988599 | 24186 | Shewanella sp. MR-4, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_008570:1852286* | 1852286 | 1875355 | 23070 | Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_008577:4183361 | 4183361 | 4206326 | 22966 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_013959:2449315* | 2449315 | 2472825 | 23511 | Sideroxydans lithotrophicus ES-1 chromosome, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_011146:1699702 | 1699702 | 1719599 | 19898 | Geobacter bemidjiensis Bem, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_014541:2978500 | 2978500 | 2996174 | 17675 | Ferrimonas balearica DSM 9799 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_005085:24623 | 24623 | 49127 | 24505 | Chromobacterium violaceum ATCC 12472, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007298:778723 | 778723 | 820099 | 41377 | Dechloromonas aromatica RCB, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_007644:2099878 | 2099878 | 2122130 | 22253 | Moorella thermoacetica ATCC 39073, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013956:1762171 | 1762171 | 1807202 | 45032 | Pantoea ananatis LMG 20103 chromosome, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015733:2658337 | 2658337 | 2703381 | 45045 | Pseudomonas putida S16 chromosome, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015519:2526047* | 2526047 | 2563066 | 37020 | Tepidanaerobacter sp. Re1 chromosome, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_003296:612000 | 612000 | 635003 | 23004 | Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012660:3689223* | 3689223 | 3716587 | 27365 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012912:777592* | 777592 | 800099 | 22508 | Dickeya zeae Ech1591, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015556:2265940* | 2265940 | 2336447 | 70508 | Pseudomonas fulva 12-X chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_012881:3362955* | 3362955 | 3380956 | 18002 | Desulfovibrio salexigens DSM 2638, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_005085:3116514 | 3116514 | 3139244 | 22731 | Chromobacterium violaceum ATCC 12472, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_002939:805794 | 805794 | 828230 | 22437 | Geobacter sulfurreducens PCA, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |