Pre_GI: BLASTN Hits

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Query: NC_007492:3801237 Pseudomonas fluorescens PfO-1, complete genome

Start: 3801237, End: 3819786, Length: 18550

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:31755003175500319347517976Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,0914BLASTN svgBLASTP svg
NC_004578:39211993921199394421523017Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-91343BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_008321:39644143964414398859924186Shewanella sp. MR-4, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008570:1852286*1852286187535523070Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008577:41833614183361420632622966Shewanella sp. ANA-3 chromosome 1, complete sequence6e-1073.8BLASTN svgBLASTP svg
NC_013959:2449315*2449315247282523511Sideroxydans lithotrophicus ES-1 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_011146:16997021699702171959919898Geobacter bemidjiensis Bem, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014541:29785002978500299617417675Ferrimonas balearica DSM 9799 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005085:24623246234912724505Chromobacterium violaceum ATCC 12472, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007298:77872377872382009941377Dechloromonas aromatica RCB, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007644:20998782099878212213022253Moorella thermoacetica ATCC 39073, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013956:17621711762171180720245032Pantoea ananatis LMG 20103 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015519:2526047*2526047256306637020Tepidanaerobacter sp. Re1 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003296:61200061200063500323004Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-0661.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012912:777592*77759280009922508Dickeya zeae Ech1591, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015556:2265940*2265940233644770508Pseudomonas fulva 12-X chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_012881:3362955*3362955338095618002Desulfovibrio salexigens DSM 2638, complete genome9e-0660BLASTN svgBLASTP svg
NC_005085:31165143116514313924422731Chromobacterium violaceum ATCC 12472, complete genome9e-0660BLASTN svgBLASTP svg
NC_002939:80579480579482823022437Geobacter sulfurreducens PCA, complete genome9e-0660BLASTN svgBLASTP svg