Query: NC_007348:2115152 Ralstonia eutropha JMP134 chromosome 2, complete sequence
Start: 2115152, End: 2160240, Length: 45089
Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria
General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_008314:36500 | 36500 | 57126 | 20627 | Ralstonia eutropha H16 chromosome 2, complete sequence | 2e-58 | 236 | BLASTN svg | BLASTP svg |
NC_012526:2431388 | 2431388 | 2451715 | 20328 | Deinococcus deserti VCD115, complete genome | 5e-34 | 155 | BLASTN svg | BLASTP svg |
NC_015422:704500 | 704500 | 758612 | 54113 | Alicycliphilus denitrificans K601 chromosome, complete genome | 2e-30 | 143 | BLASTN svg | BLASTP svg |
NC_008752:1025980 | 1025980 | 1063536 | 37557 | Acidovorax avenae subsp. citrulli AAC00-1, complete genome | 4e-25 | 125 | BLASTN svg | BLASTP svg |
NC_014313:165490 | 165490 | 189478 | 23989 | Hyphomicrobium denitrificans ATCC 51888 chromosome, complete | 4e-22 | 115 | BLASTN svg | BLASTP svg |
NC_014910:755192 | 755192 | 803365 | 48174 | Alicycliphilus denitrificans BC chromosome, complete genome | 2e-21 | 113 | BLASTN svg | BLASTP svg |
NC_008781:3688965 | 3688965 | 3713748 | 24784 | Polaromonas naphthalenivorans CJ2, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_012791:2052923 | 2052923 | 2084976 | 32054 | Variovorax paradoxus S110 chromosome 1, complete genome | 1e-16 | 97.6 | BLASTN svg | BLASTP svg |
NC_014935:1704816 | 1704816 | 1741710 | 36895 | Nitratifractor saLSUginis DSM 16511 chromosome, complete genome | 1e-16 | 97.6 | BLASTN svg | BLASTP svg |
NC_018691:1864796* | 1864796 | 1904453 | 39658 | Alcanivorax dieselolei B5 chromosome, complete genome | 2e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_014931:5088125* | 5088125 | 5122721 | 34597 | Variovorax paradoxus EPS chromosome, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_011770:2046490* | 2046490 | 2070503 | 24014 | Pseudomonas aeruginosa LESB58, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_008463:2017607* | 2017607 | 2043607 | 26001 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_019902:626934* | 626934 | 649099 | 22166 | Thioalkalivibrio nitratireducens DSM 14787, complete genome | 4e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_011662:1211660 | 1211660 | 1236628 | 24969 | Thauera sp. MZ1T, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_007759:2608173 | 2608173 | 2633751 | 25579 | Syntrophus aciditrophicus SB, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_002516:3519000 | 3519000 | 3545074 | 26075 | Pseudomonas aeruginosa PAO1, complete genome | 6e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010524:3391075 | 3391075 | 3413652 | 22578 | Leptothrix cholodnii SP-6, complete genome | 9e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_008340:1303607 | 1303607 | 1322156 | 18550 | Alkalilimnicola ehrlichei MLHE-1, complete genome | 6e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_008782:3167440 | 3167440 | 3222165 | 54726 | Acidovorax sp. JS42, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_007517:2451547 | 2451547 | 2479824 | 28278 | Geobacter metallireducens GS-15, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_012660:4149487 | 4149487 | 4175273 | 25787 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 9e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008554:4088882 | 4088882 | 4115200 | 26319 | Syntrophobacter fumaroxidans MPOB, complete genome | 9e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010508:1865602 | 1865602 | 1889219 | 23618 | Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_019940:2731105 | 2731105 | 2760614 | 29510 | Thioflavicoccus mobilis 8321 chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_018868:1960542 | 1960542 | 2016599 | 56058 | Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_015410:3093465 | 3093465 | 3157026 | 63562 | Pseudomonas mendocina NK-01 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_014973:243000 | 243000 | 262345 | 19346 | Geobacter sp. M18 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_007948:4176579 | 4176579 | 4204904 | 28326 | Polaromonas sp. JS666, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_016024:1185388* | 1185388 | 1209896 | 24509 | Candidatus Chloracidobacterium thermophilum B chromosome chromosome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014960:115614* | 115614 | 138360 | 22747 | Anaerolinea thermophila UNI-1, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008781:3302934 | 3302934 | 3327099 | 24166 | Polaromonas naphthalenivorans CJ2, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |