Pre_GI: BLASTN Hits

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Query: NC_007348:2115152 Ralstonia eutropha JMP134 chromosome 2, complete sequence

Start: 2115152, End: 2160240, Length: 45089

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008314:36500365005712620627Ralstonia eutropha H16 chromosome 2, complete sequence2e-58236BLASTN svgBLASTP svg
NC_012526:24313882431388245171520328Deinococcus deserti VCD115, complete genome5e-34155BLASTN svgBLASTP svg
NC_015422:70450070450075861254113Alicycliphilus denitrificans K601 chromosome, complete genome2e-30143BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-25125BLASTN svgBLASTP svg
NC_014313:16549016549018947823989Hyphomicrobium denitrificans ATCC 51888 chromosome, complete4e-22115BLASTN svgBLASTP svg
NC_014910:75519275519280336548174Alicycliphilus denitrificans BC chromosome, complete genome2e-21113BLASTN svgBLASTP svg
NC_008781:36889653688965371374824784Polaromonas naphthalenivorans CJ2, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_012791:20529232052923208497632054Variovorax paradoxus S110 chromosome 1, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_014935:17048161704816174171036895Nitratifractor saLSUginis DSM 16511 chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_018691:1864796*1864796190445339658Alcanivorax dieselolei B5 chromosome, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_014931:5088125*5088125512272134597Variovorax paradoxus EPS chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011770:2046490*2046490207050324014Pseudomonas aeruginosa LESB58, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008463:2017607*2017607204360726001Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_019902:626934*62693464909922166Thioalkalivibrio nitratireducens DSM 14787, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_011662:12116601211660123662824969Thauera sp. MZ1T, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_007759:26081732608173263375125579Syntrophus aciditrophicus SB, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_002516:35190003519000354507426075Pseudomonas aeruginosa PAO1, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_010524:33910753391075341365222578Leptothrix cholodnii SP-6, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_008340:13036071303607132215618550Alkalilimnicola ehrlichei MLHE-1, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_008782:31674403167440322216554726Acidovorax sp. JS42, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007517:24515472451547247982428278Geobacter metallireducens GS-15, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_012660:41494874149487417527325787Pseudomonas fluorescens SBW25 chromosome, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_008554:40888824088882411520026319Syntrophobacter fumaroxidans MPOB, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_010508:18656021865602188921923618Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_019940:27311052731105276061429510Thioflavicoccus mobilis 8321 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_018868:19605421960542201659956058Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015410:30934653093465315702663562Pseudomonas mendocina NK-01 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014973:24300024300026234519346Geobacter sp. M18 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007948:41765794176579420490428326Polaromonas sp. JS666, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_016024:1185388*1185388120989624509Candidatus Chloracidobacterium thermophilum B chromosome chromosome5e-0661.9BLASTN svgBLASTP svg
NC_014960:115614*11561413836022747Anaerolinea thermophila UNI-1, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008781:33029343302934332709924166Polaromonas naphthalenivorans CJ2, complete genome5e-0661.9BLASTN svgBLASTP svg