Query: NC_007347:1596040 Ralstonia eutropha JMP134 chromosome 1, complete sequence
Start: 1596040, End: 1614677, Length: 18638
Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria
General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010676:304405 | 304405 | 326599 | 22195 | Burkholderia phytofirmans PsJN chromosome 2, complete sequence | 1e-32 | 149 | BLASTN svg | BLASTP svg |
NC_013757:3613438 | 3613438 | 3640639 | 27202 | Geodermatophilus obscurus DSM 43160, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_014117:442616* | 442616 | 515802 | 73187 | Burkholderia sp. CCGE1002 chromosome chromosome 1, complete | 6e-19 | 103 | BLASTN svg | BLASTP svg |
NC_010557:316000 | 316000 | 339172 | 23173 | Burkholderia ambifaria MC40-6 chromosome 3, complete sequence | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_019673:1584739 | 1584739 | 1603603 | 18865 | Saccharothrix espanaensis DSM 44229 complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_007643:791500* | 791500 | 812712 | 21213 | Rhodospirillum rubrum ATCC 11170, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010170:4409683 | 4409683 | 4435297 | 25615 | Bordetella petrii, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014006:1862000 | 1862000 | 1889073 | 27074 | Sphingobium japonicum UT26S chromosome 1, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_006087:2326143 | 2326143 | 2354219 | 28077 | Leifsonia xyli subsp. xyli str. CTCB07, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013131:9903320* | 9903320 | 9957371 | 54052 | Catenulispora acidiphila DSM 44928, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007712:3511500 | 3511500 | 3534599 | 23100 | Sodalis glossinidius str. 'morsitans', complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015733:3923800* | 3923800 | 3946797 | 22998 | Pseudomonas putida S16 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_014931:2511423 | 2511423 | 2534171 | 22749 | Variovorax paradoxus EPS chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_010170:1551923 | 1551923 | 1572599 | 20677 | Bordetella petrii, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |