Some Help

Query: NC_007347:1596040 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 1596040, End: 1614677, Length: 18638

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010676:30440530440532659922195Burkholderia phytofirmans PsJN chromosome 2, complete sequence1e-32149BLASTN svgBLASTP svg
NC_013757:36134383613438364063927202Geodermatophilus obscurus DSM 43160, complete genome2e-25125BLASTN svgBLASTP svg
NC_014117:442616*44261651580273187Burkholderia sp. CCGE1002 chromosome chromosome 1, complete6e-19103BLASTN svgBLASTP svg
NC_010557:31600031600033917223173Burkholderia ambifaria MC40-6 chromosome 3, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_019673:15847391584739160360318865Saccharothrix espanaensis DSM 44229 complete genome6e-1383.8BLASTN svgBLASTP svg
NC_007643:791500*79150081271221213Rhodospirillum rubrum ATCC 11170, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014006:18620001862000188907327074Sphingobium japonicum UT26S chromosome 1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006087:23261432326143235421928077Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013131:9903320*9903320995737154052Catenulispora acidiphila DSM 44928, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007712:35115003511500353459923100Sodalis glossinidius str. 'morsitans', complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015733:3923800*3923800394679722998Pseudomonas putida S16 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_014931:25114232511423253417122749Variovorax paradoxus EPS chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_010170:15519231551923157259920677Bordetella petrii, complete genome9e-0660BLASTN svgBLASTP svg