Pre_GI: BLASTN Hits

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Query: NC_006361:2920028 Nocardia farcinica IFM 10152, complete genome

Start: 2920028, End: 2939810, Length: 19783

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_006361:30477883047788307176223975Nocardia farcinica IFM 10152, complete genome1e-165591BLASTN svgBLASTP svg
NC_013441:45390354539035455886719833Gordonia bronchialis DSM 43247, complete genome4e-48200BLASTN svgBLASTP svg
NC_014815:43857594385759442159935841Micromonospora sp. L5 chromosome, complete genome2e-34155BLASTN svgBLASTP svg
NC_014391:4672105*4672105470459932495Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-34155BLASTN svgBLASTP svg
NC_015671:20114622011462203421622755Cellvibrio gilvus ATCC 13127 chromosome, complete genome5e-32147BLASTN svgBLASTP svg
NC_013169:1410384*1410384143716826785Kytococcus sedentarius DSM 20547, complete genome2e-31145BLASTN svgBLASTP svg
NC_007908:11084941108494116189953406Rhodoferax ferrireducens T118, complete genome3e-30141BLASTN svgBLASTP svg
NC_015656:3232809*3232809325197319165Frankia symbiont of Datisca glomerata chromosome, complete genome1e-29139BLASTN svgBLASTP svg
NC_013174:1254874*1254874127885823985Jonesia denitrificans DSM 20603, complete genome1e-29139BLASTN svgBLASTP svg
NC_010572:1081236*1081236110592624691Streptomyces griseus subsp. griseus NBRC 13350, complete genome5e-29137BLASTN svgBLASTP svg
NC_019673:63943196394319646135767039Saccharothrix espanaensis DSM 44229 complete genome1e-26129BLASTN svgBLASTP svg
NC_008146:33494153349415338101531601Mycobacterium sp. MCS, complete genome5e-26127BLASTN svgBLASTP svg
NC_008705:33776973377697340929731601Mycobacterium sp. KMS, complete genome5e-26127BLASTN svgBLASTP svg
NC_009077:33232913323291335489131601Mycobacterium sp. JLS, complete genome5e-26127BLASTN svgBLASTP svg
NC_018681:53781975378197541859940403Nocardia brasiliensis ATCC 700358 chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_015957:2678544*2678544271162733084Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_003155:22110872211087223044019354Streptomyces avermitilis MA-4680, complete genome7e-25123BLASTN svgBLASTP svg
NC_010572:12937861293786131684623061Streptomyces griseus subsp. griseus NBRC 13350, complete genome7e-25123BLASTN svgBLASTP svg
NC_018750:69506956950695697113120437Streptomyces venezuelae ATCC 10712, complete genome7e-25123BLASTN svgBLASTP svg
NC_021177:71596547159654718278823135Streptomyces fulvissimus DSM 40593, complete genome7e-25123BLASTN svgBLASTP svg
NC_009142:2480608*2480608252218941582Saccharopolyspora erythraea NRRL 2338, complete genome1e-23119BLASTN svgBLASTP svg
NC_015859:16315731631573165925327681Corynebacterium variabile DSM 44702 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_014664:1360524*1360524137887118348Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_015125:1668780*1668780169404425265Microbacterium testaceum StLB037, complete genome1e-20109BLASTN svgBLASTP svg
NC_019897:36138303613830363877624947Thermobacillus composti KWC4 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_015953:32270003227000325159924600Streptomyces sp. SirexAA-E chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_002935:1237585*1237585131159974015Corynebacterium diphtheriae NCTC 13129, complete genome3e-18101BLASTN svgBLASTP svg
NC_015259:73479573479576624731453Polymorphum gilvum SL003B-26A1 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_016027:19028541902854193735834505Gluconacetobacter xylinus NBRC 3288, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_004369:41236*412366188820653Corynebacterium efficiens YS-314, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008358:26382452638245270358665342Hyphomonas neptunium ATCC 15444, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014215:49285549285551339920545Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,4e-1177.8BLASTN svgBLASTP svg
NC_006087:28490*284907567147182Leifsonia xyli subsp. xyli str. CTCB07, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015514:33972*339726268928718Cellulomonas fimi ATCC 484 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009925:64775264775267011222361Acaryochloris marina MBIC11017, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013510:5394432*5394432543843244001Thermomonospora curvata DSM 43183, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_019673:90840459084045910393319889Saccharothrix espanaensis DSM 44229 complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014215:22955002295500232183626337Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,1e-0765.9BLASTN svgBLASTP svg
NC_012590:37697*376977357935883Corynebacterium aurimucosum ATCC 700975, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014151:30488*304886009929612Cellulomonas flavigena DSM 20109 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013855:89265789265791607423418Azospirillum sp. B510 plasmid pAB510a, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_015437:2164997*2164997218559920603Selenomonas sputigena ATCC 35185 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013172:606387*60638762543019044Brachybacterium faecium DSM 4810, complete genome9e-0660BLASTN svgBLASTP svg
NC_012808:420334*42033444610925776Methylobacterium extorquens AM1, complete genome9e-0660BLASTN svgBLASTP svg
NC_010505:26576832657683268177424092Methylobacterium radiotolerans JCM 2831, complete genome9e-0660BLASTN svgBLASTP svg
NC_009051:10749931074993110370728715Methanoculleus marisnigri JR1, complete genome9e-0660BLASTN svgBLASTP svg