Pre_GI: BLASTN Hits

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Query: NC_006361:2225072 Nocardia farcinica IFM 10152, complete genome

Start: 2225072, End: 2256780, Length: 31709

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_006361:5146000*5146000517359927600Nocardia farcinica IFM 10152, complete genome1e-76295BLASTN svgBLASTP svg
NC_008391:24044432404443242322518783Burkholderia cepacia AMMD chromosome 2, complete sequence2e-60242BLASTN svgBLASTP svg
NC_020133:24219652421965244809926135Mycobacterium liflandii 128FXT, complete genome8e-35157BLASTN svgBLASTP svg
NC_008611:3579500*3579500360709927600Mycobacterium ulcerans Agy99, complete genome8e-35157BLASTN svgBLASTP svg
NC_014210:27477872747787277340525619Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-32149BLASTN svgBLASTP svg
NC_014318:5586287*5586287562248536199Amycolatopsis mediterranei U32 chromosome, complete genome5e-30141BLASTN svgBLASTP svg
NC_013169:1545890*1545890156556719678Kytococcus sedentarius DSM 20547, complete genome5e-30141BLASTN svgBLASTP svg
NC_013757:3100515*3100515312110420590Geodermatophilus obscurus DSM 43160, complete genome2e-26129BLASTN svgBLASTP svg
NC_018681:3541484*3541484357298031497Nocardia brasiliensis ATCC 700358 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_015125:222231*22223126106738837Microbacterium testaceum StLB037, complete genome2e-23119BLASTN svgBLASTP svg
NC_012669:2399649*2399649242257022922Beutenbergia cavernae DSM 12333, complete genome7e-23117BLASTN svgBLASTP svg
NC_019673:63943196394319646135767039Saccharothrix espanaensis DSM 44229 complete genome1e-21113BLASTN svgBLASTP svg
NC_019673:1988853*1988853204493756085Saccharothrix espanaensis DSM 44229 complete genome1e-21113BLASTN svgBLASTP svg
NC_013521:2193203*2193203221998826786Sanguibacter keddieii DSM 10542, complete genome4e-21111BLASTN svgBLASTP svg
NC_004551:100840*10084012468323844Tropheryma whipplei TW08/27, complete genome2e-20109BLASTN svgBLASTP svg
NC_006361:30477883047788307176223975Nocardia farcinica IFM 10152, complete genome2e-20109BLASTN svgBLASTP svg
NC_018750:77050077050079437823879Streptomyces venezuelae ATCC 10712, complete genome2e-20109BLASTN svgBLASTP svg
NC_019673:3041936*3041936305959917664Saccharothrix espanaensis DSM 44229 complete genome2e-20109BLASTN svgBLASTP svg
NC_010572:1081236*1081236110592624691Streptomyces griseus subsp. griseus NBRC 13350, complete genome3e-19105BLASTN svgBLASTP svg
NC_003888:7561923*7561923764778785865Streptomyces coelicolor A3(2), complete genome3e-19105BLASTN svgBLASTP svg
NC_014168:1294000*1294000132534231343Segniliparus rotundus DSM 44985 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_013595:3388000*3388000341046122462Streptosporangium roseum DSM 43021, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013169:872698726911060923341Kytococcus sedentarius DSM 20547, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_018720:993869*993869102159927731Bifidobacterium asteroides PRL2011 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015671:3470903*3470903349501524113Cellvibrio gilvus ATCC 13127 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015671:1865752*1865752188581920068Cellvibrio gilvus ATCC 13127 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014151:36119563611956366328251327Cellulomonas flavigena DSM 20109 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013510:3117837*3117837315092333087Thermomonospora curvata DSM 43183, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_014472:3530274*3530274355430524032Flavobacteriales bacterium HTCC2170 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_012590:14465001446500146526018761Corynebacterium aurimucosum ATCC 700975, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008392:66600066600068894522946Burkholderia cepacia AMMD chromosome 3, complete sequence4e-1281.8BLASTN svgBLASTP svg
NC_013131:32225003222500324156619067Catenulispora acidiphila DSM 44928, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014151:856354*85635488191525562Cellulomonas flavigena DSM 20109 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015312:63574696357469638125623788Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_012803:15191381519138153782318686Micrococcus luteus NCTC 2665, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_021064:816000*81600083991323914Propionibacterium avidum 44067, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014215:1243125*1243125126864225518Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,6e-1177.8BLASTN svgBLASTP svg
NC_010801:23843023843026313424705Burkholderia multivorans ATCC 17616 chromosome 3, complete6e-1177.8BLASTN svgBLASTP svg
NC_007519:3240864*3240864326641325550Desulfovibrio alaskensis G20 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_006177:2943259*2943259296594222684Symbiobacterium thermophilum IAM 14863, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010617:26398526398528723123247Kocuria rhizophila DC2201, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_021177:14182131418213144186323651Streptomyces fulvissimus DSM 40593, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014391:2579919*2579919261467434756Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014391:1812500*1812500186094748448Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_020409:393329*39332943297939651Desulfovibrio piezophilus str. nov C1TLV30 chromosome, complete2e-0869.9BLASTN svgBLASTP svg
NC_015957:51365005136500515422817729Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014657:673500*67350069431420815Caldicellulosiruptor owensensis OL chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008095:4189082*4189082423409745016Myxococcus xanthus DK 1622, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_014623:4999032*4999032501775318722Stigmatella aurantiaca DW4/3-1 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_019673:35591853559185357959920415Saccharothrix espanaensis DSM 44229 complete genome6e-0867.9BLASTN svgBLASTP svg
NC_019673:20513632051363214091689554Saccharothrix espanaensis DSM 44229 complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012522:78711737871173789754126369Rhodococcus opacus B4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011138:3182807*3182807321165528849Alteromonas macleodii 'Deep ecotype', complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007333:2093167*2093167211709923933Thermobifida fusca YX, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_010170:1470755*1470755149000819254Bordetella petrii, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_010804:28086762808676283109922424Burkholderia multivorans ATCC 17616 chromosome 1, complete9e-0763.9BLASTN svgBLASTP svg
NC_013530:17286411728641175062521985Xylanimonas cellulosilytica DSM 15894, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_013595:52213305221330524437223043Streptosporangium roseum DSM 43021, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015957:74084667408466745609947634Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015376:22410002241000226437323374Burkholderia gladioli BSR3 chromosome chromosome 2, complete4e-0661.9BLASTN svgBLASTP svg
NC_012881:3520956*3520956354109920144Desulfovibrio salexigens DSM 2638, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012881:2310141*2310141233309622956Desulfovibrio salexigens DSM 2638, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010617:77491477491482823353320Kocuria rhizophila DC2201, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_003888:77062267706226772825922034Streptomyces coelicolor A3(2), complete genome4e-0661.9BLASTN svgBLASTP svg