Pre_GI Gene

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Host: NC_004551 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004551:100840 Tropheryma whipplei TW08/27, complete genome

Host Lineage: Tropheryma whipplei; Tropheryma; Cellulomonadaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from the cerebrospinal fluid a woman who had suffered severe weight loss in Germany. The patient had been treated with antibiotics followed by a year of no treatment prior to the sample being taken. This bacterium is the causative agent of Whipple's disease. Whipple did not associate the disease with any bacterial agent, and it was only in 1961 when bacteria were detected in electron microphotographs of affected tissues that the connection was made. The bacterium cannot be cultured apart from its eukaryotic host, and it grows very slowly (reported duplication time 4-17 days).

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1008401024111572conserved hypothetical protein ATP-bindingQuickGO ontologyBLASTP
102673102936264hypothetical protein
1029211039641044integral membrane proteinQuickGO ontology
103993104355363integral membrane proteinQuickGO ontology
104352105071720ABC transport ATP-binding subunitQuickGO ontologyBLASTP
105068105424357integral membrane proteinQuickGO ontology
10661810669477tRNA-ProQuickGO ontology
1076001086491050DNA recombinaseQuickGO ontologyBLASTP
110016110624609NUDIX hydrolaseQuickGO ontologyBLASTP
1117071133441638CTP synthetaseQuickGO ontologyBLASTP
1151561167931638DNA repair protein RecNQuickGO ontologyBLASTP
116812117729918ATP-NAD kinaseQuickGO ontologyBLASTP
1177571246836927WiSP family proteinQuickGO ontology