Pre_GI: BLASTN Hits

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Query: NC_004347:4441110 Shewanella oneidensis MR-1, complete genome

Start: 4441110, End: 4465069, Length: 23960

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004347:71809171809175739939309Shewanella oneidensis MR-1, complete genome02650BLASTN svgBLASTP svg
NC_004349:393839382609922162Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence02452BLASTN svgBLASTP svg
NC_004347:1038253*1038253107053732285Shewanella oneidensis MR-1, complete genome02452BLASTN svgBLASTP svg
NC_004347:40078474007847403509927253Shewanella oneidensis MR-1, complete genome02234BLASTN svgBLASTP svg
NC_009997:36610833661083368965128569Shewanella baltica OS195, complete genome02220BLASTN svgBLASTP svg
NC_008321:29220002922000294409922100Shewanella sp. MR-4, complete genome02216BLASTN svgBLASTP svg
NC_009997:20698942069894209159921706Shewanella baltica OS195, complete genome02210BLASTN svgBLASTP svg
NC_009052:144619*14461916288518267Shewanella baltica OS155, complete genome02085BLASTN svgBLASTP svg
NC_009052:1211989*1211989123680124813Shewanella baltica OS155, complete genome02083BLASTN svgBLASTP svg
NC_009052:18999541899954192338923436Shewanella baltica OS155, complete genome01927BLASTN svgBLASTP svg
NC_009052:4168776*4168776418945120676Shewanella baltica OS155, complete genome01653BLASTN svgBLASTP svg
NC_009999:38832388326239723566Shewanella baltica OS195 plasmid pS19502, complete sequence01130BLASTN svgBLASTP svg
NC_008322:72261272261274059917988Shewanella sp. MR-7, complete genome4e-138500BLASTN svgBLASTP svg
NC_004347:79189779189781264920753Shewanella oneidensis MR-1, complete genome9e-133482BLASTN svgBLASTP svg
NC_008321:45881145881148011921309Shewanella sp. MR-4, complete genome1e-122448BLASTN svgBLASTP svg
NC_008322:1186000*1186000121709931100Shewanella sp. MR-7, complete genome2e-112414BLASTN svgBLASTP svg
NC_009997:68572668572671858932864Shewanella baltica OS195, complete genome4e-110406BLASTN svgBLASTP svg
NC_008700:2701500*2701500273890037401Shewanella amazonensis SB2B, complete genome5e-88333BLASTN svgBLASTP svg
NC_009997:72684072684075726930430Shewanella baltica OS195, complete genome7e-81309BLASTN svgBLASTP svg
NC_015554:12154011215401123622120821Alteromonas sp. SN2 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_014541:14146271414627144361328987Ferrimonas balearica DSM 9799 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_009997:26350252635025266689331869Shewanella baltica OS195, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007954:2440000*2440000246325523256Shewanella denitrificans OS217, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004547:442927*44292748635443428Erwinia carotovora subsp. atroseptica SCRI1043, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014228:1712339*1712339175523642898Xenorhabdus nematophila ATCC 19061, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015458:33289053328905335692528021Pusillimonas sp. T7-7 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012912:3853377*3853377389607042694Dickeya zeae Ech1591, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008740:443274*44327451891675643Marinobacter aquaeolei VT8, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015224:4386599*4386599441050923911Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,7e-0763.9BLASTN svgBLASTP svg
NC_015224:27019142701914272426222349Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,7e-0763.9BLASTN svgBLASTP svg
NC_015224:2095816*2095816211873722922Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,7e-0763.9BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009997:23529482352948238309930152Shewanella baltica OS195, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008750:1659095*1659095168328224188Shewanella sp. W3-18-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008563:33321143332114335140519292Escherichia coli APEC O1, complete genome3e-0661.9BLASTN svgBLASTP svg