Pre_GI: BLASTN Hits

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Query: NC_004347:4302768 Shewanella oneidensis MR-1, complete genome

Start: 4302768, End: 4337196, Length: 34429

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009053:1942973*1942973197934536373Actinobacillus pleuropneumoniae L20, complete genome2e-23119BLASTN svgBLASTP svg
NC_010939:1986263*1986263202856742305Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete5e-21111BLASTN svgBLASTP svg
NC_007912:3403101*3403101342568122581Saccharophagus degradans 2-40, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_018419:86250086250088609923600Secondary endosymbiont of Ctenarytaina eucalypti chromosome,1e-1593.7BLASTN svgBLASTP svg
NC_013960:2440453*2440453245844817996Nitrosococcus halophilus Nc4 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007645:6096345*6096345612066624322Hahella chejuensis KCTC 2396, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007298:219783*21978324447124689Dechloromonas aromatica RCB, complete genome1e-0663.9BLASTN svgBLASTP svg