Pre_GI: BLASTN Hits

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Query: NC_004347:3303957 Shewanella oneidensis MR-1, complete genome

Start: 3303957, End: 3325457, Length: 21501

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009997:35831663583166360265419489Shewanella baltica OS195, complete genome0787BLASTN svgBLASTP svg
NC_009052:33819433381943341170229760Shewanella baltica OS155, complete genome1e-146527BLASTN svgBLASTP svg
NC_007954:3171081*3171081321159940519Shewanella denitrificans OS217, complete genome3e-46194BLASTN svgBLASTP svg
NC_011566:1639444*1639444165938719944Shewanella piezotolerans WP3, complete genome2e-44188BLASTN svgBLASTP svg
NC_009901:1693500*1693500173209938600Shewanella pealeana ATCC 700345, complete genome6e-41176BLASTN svgBLASTP svg
NC_008700:2701500*2701500273890037401Shewanella amazonensis SB2B, complete genome1e-29139BLASTN svgBLASTP svg
NC_011753:20617820617823311626939Vibrio splendidus LGP32 chromosome 1, complete genome2e-19105BLASTN svgBLASTP svg
NC_010694:15020191502019153332131303Erwinia tasmaniensis, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_008321:1523323*1523323156037837056Shewanella sp. MR-4, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_008610:94498594498596460219618Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),3e-1281.8BLASTN svgBLASTP svg
NC_009092:15995261599526164486445339Shewanella loihica PV-4, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010334:1783500*1783500181555632057Shewanella halifaxensis HAW-EB4, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008577:15799501579950160290022951Shewanella sp. ANA-3 chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_004459:767127*76712778659919473Vibrio vulnificus CMCP6 chromosome I, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_004129:4993974*4993974502072326750Pseudomonas fluorescens Pf-5, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015672:399522*39952241941219891Flexistipes sinusarabici DSM 4947 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014166:2498500*2498500256909970600Arcobacter nitrofigilis DSM 7299 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009654:89449289449291290618415Marinomonas sp. MWYL1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012912:3853377*3853377389607042694Dickeya zeae Ech1591, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010939:1633000*1633000166140328404Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete2e-0765.9BLASTN svgBLASTP svg
NC_008345:3394154*3394154341832224169Shewanella frigidimarina NCIMB 400, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013421:32794993279499331516735669Pectobacterium wasabiae WPP163, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013416:16214691621469165023328765Aggregatibacter actinomycetemcomitans D11S-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009348:14759551475955153571059756Aeromonas salmonicida subsp. salmonicida A449, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005139:30542030542033120425785Vibrio vulnificus YJ016 chromosome I, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_004603:23000023000025659726598Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete3e-0661.9BLASTN svgBLASTP svg
NC_005139:34350034350037669433195Vibrio vulnificus YJ016 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_012880:38273903827390385759930210Dickeya dadantii Ech703, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014012:16769831676983170572328741Shewanella violacea DSS12, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_018697:2055725*2055725207885823134Cycloclasticus sp. P1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015224:13910881391088142166930582Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-0560BLASTN svgBLASTP svg
NC_013961:2260250*2260250228983729588Erwinia amylovora, complete genome1e-0560BLASTN svgBLASTP svg
NC_005363:16043371604337164409939763Bdellovibrio bacteriovorus HD100, complete genome1e-0560BLASTN svgBLASTP svg