Query: NC_004347:3303957 Shewanella oneidensis MR-1, complete genome
Start: 3303957, End: 3325457, Length: 21501
Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_009997:3583166 | 3583166 | 3602654 | 19489 | Shewanella baltica OS195, complete genome | 0 | 787 | BLASTN svg | BLASTP svg |
NC_009052:3381943 | 3381943 | 3411702 | 29760 | Shewanella baltica OS155, complete genome | 1e-146 | 527 | BLASTN svg | BLASTP svg |
NC_007954:3171081* | 3171081 | 3211599 | 40519 | Shewanella denitrificans OS217, complete genome | 3e-46 | 194 | BLASTN svg | BLASTP svg |
NC_011566:1639444* | 1639444 | 1659387 | 19944 | Shewanella piezotolerans WP3, complete genome | 2e-44 | 188 | BLASTN svg | BLASTP svg |
NC_009901:1693500* | 1693500 | 1732099 | 38600 | Shewanella pealeana ATCC 700345, complete genome | 6e-41 | 176 | BLASTN svg | BLASTP svg |
NC_008700:2701500* | 2701500 | 2738900 | 37401 | Shewanella amazonensis SB2B, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
NC_011753:206178 | 206178 | 233116 | 26939 | Vibrio splendidus LGP32 chromosome 1, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_010694:1502019 | 1502019 | 1533321 | 31303 | Erwinia tasmaniensis, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_008321:1523323* | 1523323 | 1560378 | 37056 | Shewanella sp. MR-4, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_008610:944985 | 944985 | 964602 | 19618 | Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_009092:1599526 | 1599526 | 1644864 | 45339 | Shewanella loihica PV-4, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_010334:1783500* | 1783500 | 1815556 | 32057 | Shewanella halifaxensis HAW-EB4, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_008577:1579950 | 1579950 | 1602900 | 22951 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_004459:767127* | 767127 | 786599 | 19473 | Vibrio vulnificus CMCP6 chromosome I, complete sequence | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_004129:4993974* | 4993974 | 5020723 | 26750 | Pseudomonas fluorescens Pf-5, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015672:399522* | 399522 | 419412 | 19891 | Flexistipes sinusarabici DSM 4947 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014166:2498500* | 2498500 | 2569099 | 70600 | Arcobacter nitrofigilis DSM 7299 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009654:894492 | 894492 | 912906 | 18415 | Marinomonas sp. MWYL1, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_012912:3853377* | 3853377 | 3896070 | 42694 | Dickeya zeae Ech1591, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015424:3112637* | 3112637 | 3180033 | 67397 | Aeromonas veronii B565 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010939:1633000* | 1633000 | 1661403 | 28404 | Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008345:3394154* | 3394154 | 3418322 | 24169 | Shewanella frigidimarina NCIMB 400, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013421:3279499 | 3279499 | 3315167 | 35669 | Pectobacterium wasabiae WPP163, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013416:1621469 | 1621469 | 1650233 | 28765 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_009348:1475955 | 1475955 | 1535710 | 59756 | Aeromonas salmonicida subsp. salmonicida A449, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_005139:305420 | 305420 | 331204 | 25785 | Vibrio vulnificus YJ016 chromosome I, complete sequence | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_004603:230000 | 230000 | 256597 | 26598 | Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_005139:343500 | 343500 | 376694 | 33195 | Vibrio vulnificus YJ016 chromosome I, complete sequence | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012880:3827390 | 3827390 | 3857599 | 30210 | Dickeya dadantii Ech703, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014012:1676983 | 1676983 | 1705723 | 28741 | Shewanella violacea DSS12, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_018697:2055725* | 2055725 | 2078858 | 23134 | Cycloclasticus sp. P1 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015224:1391088 | 1391088 | 1421669 | 30582 | Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome, | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_013961:2260250* | 2260250 | 2289837 | 29588 | Erwinia amylovora, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_005363:1604337 | 1604337 | 1644099 | 39763 | Bdellovibrio bacteriovorus HD100, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |