Pre_GI: BLASTN Hits

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Query: NC_004307:1815825 Bifidobacterium longum NCC2705, complete genome

Start: 1815825, End: 1848775, Length: 32951

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from infant feces. Normal human gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010816:18524061852406187962927224Bifidobacterium longum DJO10A, complete genome013000BLASTN svgBLASTP svg
NC_004307:11083251108325114340935085Bifidobacterium longum NCC2705, complete genome04811BLASTN svgBLASTP svg
NC_015052:2383865*2383865240599922135Bifidobacterium longum subsp. infantis 157F, complete genome04738BLASTN svgBLASTP svg
NC_015052:2071759*2071759209363321875Bifidobacterium longum subsp. infantis 157F, complete genome04732BLASTN svgBLASTP svg
NC_015052:21815142181514221381832305Bifidobacterium longum subsp. infantis 157F, complete genome04179BLASTN svgBLASTP svg
NC_010816:1989868*1989868201173521868Bifidobacterium longum DJO10A, complete genome02422BLASTN svgBLASTP svg
NC_010816:2326453*2326453235368827236Bifidobacterium longum DJO10A, complete genome9e-143515BLASTN svgBLASTP svg
NC_015067:21360482136048216896932922Bifidobacterium longum subsp. longum JCM 1217, complete genome7e-94353BLASTN svgBLASTP svg
NC_015067:1528984*1528984156187832895Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-66262BLASTN svgBLASTP svg
NC_013714:22943422294342232581731476Bifidobacterium dentium Bd1, complete genome2e-44188BLASTN svgBLASTP svg
NC_012925:11258761125876114867522800Streptococcus suis P1/7, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_018720:357716*35771638686729152Bifidobacterium asteroides PRL2011 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_013715:1750403*1750403177144221040Rothia mucilaginosa DY-18, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012815:16039161603916165709953184Bifidobacterium animalis subsp. lactis DSM 10140, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_012814:15992411599241165827959039Bifidobacterium animalis subsp. lactis Bl-04, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008541:29895002989500300743117932Arthrobacter sp. FB24 chromosome 1, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_018581:11809511180951122156540615Gordonia sp. KTR9 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013204:23714992371499240814536647Eggerthella lenta DSM 2243, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008358:79839079839083934340954Hyphomonas neptunium ATCC 15444, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011886:26966712696671271597719307Arthrobacter chlorophenolicus A6, complete genome4e-0661.9BLASTN svgBLASTP svg