Pre_GI: BLASTP Hits

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Query: NC_020134:134875:156452 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 156452, End: 157555, Length: 1104

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020207:843822:8523038523038533821080Enterococcus faecium NRRL B-2354, complete genomehypothetical protein1e-33144
NC_017221:1763914:1797180179718017982891110Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein2e-1790.1
NC_017219:2292040:2328131232813123293001170Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein1e-1584.7
NC_011593:2288993:2328313232831323294821170Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein1e-1584.7
NC_013740:660880:6705716705716716351065Acidaminococcus fermentans DSM 20731, complete genomehypothetical protein5e-1479
NC_010729:1385217:1386747138674713877901044Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein2e-1170.5
NC_015500:987641:1003465100346510046011137Treponema brennaborense DSM 12168 chromosome, complete genomeputative capsular polysaccharide polymerase1e-1067.4
NC_015500:2197000:2210469221046922116051137Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein1e-0964.7
NC_016603:3181592:3195058319505831961221065Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomehypothetical protein2e-0757.4
NC_014803:475355:4830734830734841731101Pseudoalteromonas sp. SM9913 chromosome chromosome I, completecapsular polysaccharide polymerase2e-0757
NC_013410:3280039:3314005331400533150811077Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein3e-0756.6
NC_019968:891904:9078809078809090701191Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein4e-0755.8
NC_004567:1089231:1096951109695110980901140Lactobacillus plantarum WCFS1, complete genomepolysaccharide polymerase7e-0755.5
NC_014370:1117283:1133112113311211342871176Prevotella melaninogenica ATCC 25845 chromosome chromosome I,hypothetical protein7e-0755.1
NC_015311:1612366:1626508162650816276861179Prevotella denticola F0289 chromosome, complete genomehypothetical protein2e-0653.5
NC_013204:2826500:285866328586632859637975Eggerthella lenta DSM 2243, complete genomehypothetical protein5e-0652.4
NC_013889:1623697:1647234164723416483251092Thioalkalivibrio sp. K90mix chromosome, complete genomehypothetical protein5e-0652.4
NC_017068:2827568:2837859283785928389201062Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein6e-0652.4
NC_013037:5536433:5550832555083255519471116Dyadobacter fermentans DSM 18053, complete genomehypothetical protein9e-0651.6