Pre_GI: BLASTP Hits

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Query: NC_020134:134875:154624 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 154624, End: 155325, Length: 702

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013165:1665014:1666876166687616686841809Slackia heliotrinireducens DSM 20476, complete genomeLPS biosynthesis protein9e-30130
NC_013204:2371499:238343723834372384297861Eggerthella lenta DSM 2243, complete genomeLicD family protein4e-27121
NC_009615:4425500:443994744399474440861915Parabacteroides distasonis ATCC 8503 chromosome, complete genomelipopolysaccharide biosynthesis protein2e-22105
NC_014363:645397:661761661761662606846Olsenella uli DSM 7084 chromosome, complete genomeLicD family protein5e-22104
NC_013204:2371499:238167523816752382529855Eggerthella lenta DSM 2243, complete genomeLicD family protein5e-21101
NC_018867:1161648:118815111881511188960810Dehalobacter sp. CF chromosome, complete genomeLicD family protein1e-20100
NC_015152:272500:293889293889294728840Spirochaeta sp. Buddy chromosome, complete genomeLicD family protein3e-2099
NC_015737:2691246:275495627549562755768813Clostridium sp. SY8519, complete genomehypothetical protein2e-1995.9
NC_016077:998741:102856310285631029525963Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein5e-1994.7
NC_013165:1407000:141870114187011419669969Slackia heliotrinireducens DSM 20476, complete genomeLPS biosynthesis protein5e-1788.2
NC_009615:2184300:219244321924432193351909Parabacteroides distasonis ATCC 8503 chromosome, complete genomelipopolysaccharide biosynthesis protein1e-1687
NC_013740:842841:860269860269861132864Acidaminococcus fermentans DSM 20731, complete genomeLicD family protein1e-1686.7
NC_014484:1690272:169878216987821699657876Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein2e-1686.3
NC_008054:1617544:162537716253771626288912Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIIM, Hypothetical protein3e-1685.5
NC_008529:1634403:164056316405631641474912Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeLPS biosynthesis protein3e-1685.1
NC_014363:645397:653831653831654697867Olsenella uli DSM 7084 chromosome, complete genomeLicD family protein6e-1684.3
NC_014924:725380:738804738804739697894Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeLicD family protein1e-1583.6
NC_015311:2826000:283314028331402834012873Prevotella denticola F0289 chromosome, complete genomeLICD family protein2e-1583.2
NC_016077:998741:103340910334091034191783Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein3e-1582.4
NC_014033:1691822:170608717060871706884798Prevotella ruminicola 23 chromosome, complete genomeLicD family protein9e-1580.5
NC_014833:3362500:3362802336280233642351434Ruminococcus albus 7 chromosome, complete genomeLicD family protein3e-1479
NC_013530:2819569:284511128451112845965855Xylanimonas cellulosilytica DSM 15894, complete genomeLicD family protein6e-1477.8
NC_012778:263241:2693522693522715982247Eubacterium eligens ATCC 27750, complete genomelipopolysaccharide cholinephosphotransferase4e-1375.1
NC_008309:1628939:165215516521551652955801Haemophilus somnus 129PT, complete genomelipopolysaccharide choline phosphotransferase1e-1273.6
NC_013204:2826500:286077028607702861591822Eggerthella lenta DSM 2243, complete genomeLicD family protein1e-1273.6
NC_013204:2826500:283942228394222840255834Eggerthella lenta DSM 2243, complete genomeLicD family protein5e-1271.2
NC_012778:263241:2673122673122693182007Eubacterium eligens ATCC 27750, complete genomelipopolysaccharide cholinephosphotransferase1e-1066.6
NC_014334:1954333:196817619681761968991816Lactobacillus casei str. Zhang chromosome, complete genomeputative LicD-family phosphotransferase2e-1065.9
NC_013165:1407000:142395514239551424740786Slackia heliotrinireducens DSM 20476, complete genomeLPS biosynthesis protein2e-0962.8
NC_013410:1203937:121704412170441217868825Fibrobacter succinogenes subsp. succinogenes S85 chromosome,LicD family protein1e-0860.5
NC_009614:3748950:375072737507273751560834Bacteroides vulgatus ATCC 8482 chromosome, complete genomelipopolysaccharide biosynthesis protein3e-0858.9
NC_021175:1973880:198462719846271985550924Streptococcus oligofermentans AS 1.3089, complete genomeLPS biosynthesis protein3e-0858.9
NC_011883:1182000:118961111896111190558948Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,LicD family protein7e-0857.8
NC_015067:2136048:215401621540162154936921Bifidobacterium longum subsp. longum JCM 1217, complete genomephosphotransferase2e-0755.8
NC_009615:1627961:164066816406681641627960Parabacteroides distasonis ATCC 8503 chromosome, complete genomecholinephosphotransferase5e-0754.7
NC_004307:1815825:1829701182970118307741074Bifidobacterium longum NCC2705, complete genomehypothetical protein with similarity to LicD required for phosphorylcholine incorporation in teichoic and lipoteichoic acids1e-0653.1
NC_003454:1889529:190249719024971903282786Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeLipooligosaccharide cholinephosphotransferase8e-0650.8