Pre_GI: BLASTP Hits

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Query: NC_018080:6048516:6067695 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 6067695, End: 6068192, Length: 498

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016791:3953972:398156539815653982005441Clostridium sp. BNL1100 chromosome, complete genometranscriptional regulator4e-1270.9
NC_016791:3891272:390422139042213904661441Clostridium sp. BNL1100 chromosome, complete genometranscriptional regulator1e-0962.4
NC_014307:3240430:325987732598773260389513Ralstonia solanacearum CFBP2957 chromosome, complete genomeMarR family transcriptional regulator1e-0858.9
NC_015711:3122000:314673031467303147248519Myxococcus fulvus HW-1 chromosome, complete genomeMarR family transcriptional regulator1e-0858.9
NC_008699:2916752:293265929326592933081423Nocardioides sp. JS614, complete genomeregulatory protein, MarR2e-0755.5
NC_014311:3348102:336288433628843363396513Ralstonia solanacearum PSI07 chromosome, complete genomeMarR family transcriptional regulator3e-0754.7
NC_009338:555587:576201576201576719519Mycobacterium gilvum PYR-GCK chromosome, complete genomeMarR family transcriptional regulator4e-0754.3
NC_006322:2851215:287046028704602870903444Bacillus licheniformis ATCC 14580, complete genomeYsmB4e-0754.3
NC_006270:2850354:287024728702472870690444Bacillus licheniformis ATCC 14580, complete genomeprobable transcriptional regulator YsmB4e-0754.3
NC_014814:169374:196482196482197039558Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, MarR family3e-0754.3
NC_009077:1725683:175349617534961754014519Mycobacterium sp. JLS, complete genometranscriptional regulator, MarR family4e-0753.9
NC_008705:1790222:181803518180351818553519Mycobacterium sp. KMS, complete genometranscriptional regulator, MarR family4e-0753.9
NC_009338:630130:649885649885650403519Mycobacterium gilvum PYR-GCK chromosome, complete genomeMarR family transcriptional regulator4e-0753.9
NC_015555:2359000:238402623840262384508483Thermoanaerobacterium xylanolyticum LX-11 chromosome, completetranscriptional regulator, MarR family7e-0753.1
NC_016582:9422650:943074694307469431297552Streptomyces bingchenggensis BCW-1 chromosome, complete genomeMarR family transcriptional regulator7e-0753.1
NC_014152:927969:930228930228930704477Thermincola sp. JR, complete genometranscriptional regulator, MarR family1e-0652.8
NC_016111:2257166:227261322726132273110498Streptomyces cattleya NRRL 8057, complete genomeHTH-type transcriptional regulator pecS1e-0652.4
UCMB5137:808967:811798811798812250453Bacillus atrophaeus UCMB-5137unknown2e-0652
NC_015977:442493:467494467494467934441Roseburia hominis A2-183 chromosome, complete genomeMarR family transcriptional regulator2e-0651.6
NC_007296:1073784:108834310883431088768426Streptococcus pyogenes MGAS6180, complete genometranscriptional regulator, MarR family4e-0650.8
NC_010655:2065567:206695120669512067385435Akkermansia muciniphila ATCC BAA-835, complete genometranscriptional regulator, MarR family5e-0650.4
NC_007168:665284:685098685098685541444Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein7e-0650.1
NC_014328:4546390:456014745601474560623477Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative MarR family transcriptional regulator7e-0650.1
NC_021182:4882494:489591748959174896384468Clostridium pasteurianum BC1, complete genometranscriptional regulator9e-0649.7
NC_003296:262118:279370279370279834465Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN9e-0649.7
NC_014103:2635695:265494026549402655377438Bacillus megaterium DSM319 chromosome, complete genomeputative marR-family transcriptional regulator9e-0649.3