Pre_GI: BLASTP Hits

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Query: NC_018080:5192264:5199013 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 5199013, End: 5199513, Length: 501

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:1144272:115600511560051156430426Pseudomonas mendocina NK-01 chromosome, complete genomeTfp pilus assembly protein FimT-like protein9e-25112
NC_009434:1068281:108007110800711080565495Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein FimT5e-23106
NC_009439:1075170:108790110879011088410510Pseudomonas mendocina ymp, complete genomeTfp pilus assembly protein FimT-like protein3e-1787.8
NC_014924:936158:949900949900950445546Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeputative type IV pilus assembly protein fimt1e-0755.8