Pre_GI: BLASTP Hits

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Query: NC_018080:5091772:5180480 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 5180480, End: 5182300, Length: 1821

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:4716000:4733083473308347351762094Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-46186
NC_006905:4638707:4655773465577346578602088Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein7e-46185
NC_007973:3065632:3078310307831030803402031Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein3e-28127
NC_020272:3706722:3718728371872837207552028Bacillus amyloliquefaciens IT-45, complete genomechromosome segregation ATPase-like protein4e-1480.5
NC_014844:2721746:2741575274157527426721098Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein9e-1479
NC_014844:2721746:274400027440002744590591Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome1e-1172
NC_010655:373437:3854863854863875012016Akkermansia muciniphila ATCC BAA-835, complete genomehypothetical protein8e-1169.3
NC_015571:2044000:2086224208622420882572034Porphyromonas gingivalis TDC60, complete genomehypothetical protein2e-1068.2