Pre_GI: BLASTP Hits

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Query: NC_018080:5091772:5152787 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 5152787, End: 5153368, Length: 582

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:4527457:462777946277794628360582Pseudomonas aeruginosa PA7 chromosome, complete genomesoluble lytic murein transglycosylase5e-84310
NC_004129:5373886:542417254241725424723552Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-45182
NC_007005:1636875:164362716436271644184558Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein7e-45180
NC_008825:2525380:254374625437462544366621Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-38158
NC_011662:1058794:106148910614891062109621Thauera sp. MZ1T, complete genomeLytic transglycosylase catalytic3e-38157
NC_008782:2326439:234502623450262345646621Acidovorax sp. JS42, complete genomeLytic transglycosylase, catalytic3e-38157
NC_015422:1876102:187610218761021876722621Alicycliphilus denitrificans K601 chromosome, complete genomelytic transglycosylase catalytic subunit5e-38157
NC_009138:1974935:201218120121812012771591Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide8e-38156
NC_011901:2983555:298297429829742983558585Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completelytic transglycosylase5e-37154
NC_011992:1234610:123678112367811237371591Acidovorax ebreus TPSY, complete genomeLytic transglycosylase catalytic2e-36152
NC_010002:4544818:455964445596444560249606Delftia acidovorans SPH-1, complete genomeLytic transglycosylase catalytic2e-36151
NC_010170:4533416:453615045361504536755606Bordetella petrii, complete genomeconserved exported protein2e-36151
NC_003919:2639080:263908026390802639691612Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein1e-35149
NC_010170:1498253:153267115326711533261591Bordetella petrii, complete genomeconserved exported protein2e-35148
NC_012691:2614603:265685726568572657447591Tolumonas auensis DSM 9187, complete genomeLytic transglycosylase catalytic2e-35148
NC_008752:558828:573364573364573972609Acidovorax avenae subsp. citrulli AAC00-1, complete genomeLytic transglycosylase, catalytic4e-35147
NC_006513:1379735:145965414596541460235582Azoarcus sp. EbN1, complete genomehypothetical protein7e-34143
NC_012912:483390:515976515976516566591Dickeya zeae Ech1591, complete genomeputative signal peptide6e-33140
NC_008344:49039:969949699497584591Nitrosomonas eutropha C91, complete genomeLytic transglycosylase, catalytic4e-31134
NC_014532:3555550:357369035736903574481792Halomonas elongata DSM 2581, complete genomelytic transglycosylase, catalytic2e-30132
NC_012731:600518:617570617570618088519Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-30131
NC_016845:4539381:454202745420274542596570Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-29127
NC_009832:358291:375841375841376533693Serratia proteamaculans 568, complete genomeLytic transglycosylase catalytic5e-27120
NC_014029:331919:360482360482361174693Yersinia pestis Z176003 chromosome, complete genomehypothetical protein7e-27120
NC_020181:3328844:334511033451103345643534Enterobacter aerogenes EA1509E, complete genomeFIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)7e-27120
NC_015567:313035:330460330460331146687Serratia sp. AS9 chromosome, complete genomelytic transglycosylase catalytic subunit2e-26118
NC_015566:316340:330295330295330981687Serratia sp. AS12 chromosome, complete genomelytic transglycosylase catalytic subunit2e-26118
NC_009708:4182460:419818641981864198824639Yersinia pseudotuberculosis IP 31758 chromosome, complete genometransglycosylase3e-25114
NC_016830:3869572:392583039258303926225396Pseudomonas fluorescens F113 chromosome, complete genomeSoluble lytic murein transglycosylase subunit3e-25114
NC_004547:611178:624021624021624608588Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-23108
NC_013716:3512950:354301235430123543440429Citrobacter rodentium ICC168, complete genome1e-1995.9
NC_007484:667879:677299677299677862564Nitrosococcus oceani ATCC 19707, complete genomeLytic transglycosylase, catalytic2e-1582
NC_015572:2186394:219838421983842198950567Methylomonas methanica MC09 chromosome, complete genomelytic transglycosylase catalytic subunit3e-1374.7
NC_010554:2646806:265392226539222654470549Proteus mirabilis HI4320, complete genomephage transglycosylase4e-0754.3
NC_017062:547317:569324569324570112789Rickettsia typhi str. B9991CWPP chromosome, complete genomehypothetical protein4e-0754.3