Pre_GI: BLASTP Hits

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Query: NC_018080:1834754:1844025 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 1844025, End: 1845053, Length: 1029

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:2017607:2026846202684620279281083Pseudomonas aeruginosa UCBPP-PA14, complete genomeO-antigen chain length regulator3e-154544
NC_011770:2046490:2055868205586820568691002Pseudomonas aeruginosa LESB58, complete genomeO-antigen chain length regulator4e-98358
NC_009656:1994392:2003647200364720046961050Pseudomonas aeruginosa PA7 chromosome, complete genomeO-antigen chain length regulator7e-90330
NC_016830:1901488:1909883190988319109291047Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein2e-65249
NC_015379:1887275:1895604189560418966531050Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative chain length determinant protein1e-63244
NC_020829:5174354:520016652001665201053888Pseudomonas denitrificans ATCC 13867, complete genomeO-antigen chain length regulator3e-52205
NC_008027:1559083:1570238157023815712781041Pseudomonas entomophila L48, complete genomeO-antigen chain length regulator protein (Wzz)1e-51203
NC_010322:1520973:1529343152934315303861044Pseudomonas putida GB-1 chromosome, complete genomelipopolysaccharide biosynthesis protein3e-46186
NC_006300:600516:6071416071416083311191Mannheimia succiniciproducens MBEL55E, complete genomehypothetical protein3e-0963.2
NC_009655:866281:8730508730508740901041Actinobacillus succinogenes 130Z chromosome, complete genomelipopolysaccharide biosynthesis protein7e-0961.6
NC_011741:2155947:216070821607082161688981Escherichia coli IAI1 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains7e-0755.1
CU928160:2155947:216070821607082161688981Escherichia coli IAI1 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains7e-0755.1
NC_015424:3112637:3121677312167731227831107Aeromonas veronii B565 chromosome, complete genomeO-antigen chain length determinant1e-0654.3
NC_007963:1908964:1908964190896419100611098Chromohalobacter salexigens DSM 3043, complete genomelipopolysaccharide biosynthesis4e-0652.8
NC_016816:1676460:1702320170232017033241005Pantoea ananatis LMG 5342, complete genomepolysaccharide antigen chain regulator7e-0652
NC_020063:1659795:168299716829971683974978Enterobacteriaceae bacterium strain FGI 57, complete genomechain length determinant protein9e-0651.6