Pre_GI: BLASTP Hits

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Query: NC_017986:2985514:2992080 Pseudomonas putida ND6 chromosome, complete genome

Start: 2992080, End: 2992403, Length: 324

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008027:5533311:554080755408075541130324Pseudomonas entomophila L48, complete genometranscriptional regulator, Cro/CI family2e-49194
NC_015633:2801321:281229628122962812634339Vibrio anguillarum 775 chromosome chromosome I, complete sequencetranscriptional regulator2e-27121
NC_007606:1999870:200177620017762002066291Shigella dysenteriae Sd197, complete genomehypothetical protein2e-0857.8
NC_009339:252174:269580269580269858279Mycobacterium gilvum PYR-GCK plasmid pMFLV01, complete sequencehelix-turn-helix domain-containing protein2e-0857.4
NC_014032:825793:891972891972892427456Salinibacter ruber M8 chromosome, complete genomehypothetical protein6e-0856.2
NC_007492:3954345:395990839599083960219312Pseudomonas fluorescens PfO-1, complete genomehypothetical protein1e-0651.6
NC_012962:4942000:494243649424364942774339Photorhabdus asymbiotica, complete genomehypothetical protein4e-0650.1
NC_016906:4562874:457355945735594574206648Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative DNA-binding protein6e-0649.7