Pre_GI: BLASTP Hits

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Query: NC_017269:303500:322801 Vibrio cholerae LMA3984-4 chromosome II, complete sequence

Start: 322801, End: 322917, Length: 117

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:370471:425446425446425703258Vibrio cholerae IEC224 chromosome II, complete sequencetoxin-antitoxin (TA) system antitoxin6e-1579.7
NC_016446:119914:126168126168126425258Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeantitoxin of toxin-antitoxin stability system6e-1579.7
NC_012667:931390:960363960363960620258Vibrio cholerae MJ-1236 chromosome 2, complete genomeantitoxin of toxin-antitoxin stability system6e-1579.7
NC_012583:440420:453856453856454113258Vibrio cholerae O395 chromosome chromosome II, complete sequenceAntitoxin of toxin-antitoxin stability system6e-1579.7
NC_012583:361241:395426395426395683258Vibrio cholerae O395 chromosome chromosome II, complete sequenceAntitoxin of toxin-antitoxin stability system6e-1579.7
NC_009456:787322:868259868259868516258Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein6e-1579.7
NC_009456:787322:809829809829810086258Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein6e-1579.7
NC_002506:370629:425627425627425884258Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein6e-1579.7
NC_004459:2443000:245067424506742450931258Vibrio vulnificus CMCP6 chromosome I, complete sequenceAntitoxin of toxin-antitoxin stability system2e-1374.3
NC_004459:2443000:247506024750602475317258Vibrio vulnificus CMCP6 chromosome I, complete sequenceAntitoxin of toxin-antitoxin stability system2e-1374.3
NC_013456:1819421:182686218268621827119258Vibrio sp. Ex25 chromosome 1, complete genomeantitoxin of toxin-antitoxin stability system2e-1270.9
NC_012691:3126500:312688931268893127146258Tolumonas auensis DSM 9187, complete genomeprevent-host-death family protein9e-1062.4
NC_014836:2620871:263533126353312635588258Desulfurispirillum indicum S5 chromosome, complete genomeprevent-host-death family protein6e-0856.2
NC_014836:2620871:263197326319732632230258Desulfurispirillum indicum S5 chromosome, complete genomeprevent-host-death family protein6e-0856.2
NC_016010:65949:693506935069607258Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein6e-0752.8
NC_007508:64955:698166981670073258Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein3e-0650.4