Pre_GI: BLASTP Hits

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Query: NC_017265:2306500:2309176 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 2309176, End: 2309307, Length: 132

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:2806827:284776428477642848051288Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,IS1400 transposase A2e-1167.8
NC_014306:3006028:302442730244273024714288Erwinia billingiae Eb661, complete genomeIS1400 transposase A1e-0962
NC_014306:4106569:411578241157824116069288Erwinia billingiae Eb661, complete genomeIS1400 transposase A5e-0959.7
NC_012214:2805297:281364028136402813831192Erwinia pyrifoliae Ep1/96, complete genome1e-0858.5
NC_010465:1790739:180366518036651803931267Yersinia pseudotuberculosis YPIII, complete genometransposase IS3/IS911 family protein4e-0857
NC_012214:1212616:122529212252921225558267Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, orf B3e-0857
NC_015061:3111211:312652731265273126793267Rahnella sp. Y9602 chromosome, complete genometransposase IS3/IS911 family protein3e-0857
NC_017047:3174588:319112931911293191395267Rahnella aquatilis HX2 chromosome, complete genomeIS1400 transposase A3e-0857
NC_013592:804288:817801817801818067267Dickeya dadantii Ech586, complete genometransposase IS3/IS911 family protein3e-0753.9
NC_012731:1088321:109771710977171097983267Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometransposase IS3/IS911 family protein3e-0753.9
NC_014618:2705769:271424527142452714511267Enterobacter cloacae SCF1 chromosome, complete genometransposase IS3/IS911 family protein3e-0753.9
NC_014500:3175283:320049432004943200760267Dickeya dadantii 3937 chromosome, complete genomeISEch8 OrfA3e-0753.9
NC_012779:1966205:198580419858041985992189Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-0753.5
NC_016845:575123:594225594225594491267Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,IS3 family element, transposase orfA4e-0753.5
NC_012731:2302974:231382723138272313931105Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometransposase4e-0753.1
NC_008253:2056734:206788120678812068147267Escherichia coli 536, complete genomeIS1400 transposase A7e-0752.8
NC_020181:421941:431668431668431934267Enterobacter aerogenes EA1509E, complete genomeFIG01046424: hypothetical protein7e-0752.8
NC_007946:2155454:216656921665692166835267Escherichia coli UTI89, complete genomeputative transposase7e-0752.8
NC_013956:3273340:328860032886003288866267Pantoea ananatis LMG 20103 chromosome, complete genomeLcrS7e-0752.8
NC_004431:2304280:231540423154042315670267Escherichia coli CFT073, complete genomeTransposase7e-0752.8
NC_009792:808332:817711817711817977267Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-0752.8
NC_011283:4966471:497889149788914979157267Klebsiella pneumoniae 342 chromosome, complete genomeIS3 family element, transposase orfA6e-0752.8
NC_011205:4718239:473601447360144736292279Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transposase family protein6e-0752.8
NC_011274:4538722:455649445564944556772279Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transposase6e-0752.8
NC_011294:4560902:457867645786764578954279Salmonella enterica subsp. enterica serovar Enteritidis strtransposase6e-0752.8
NC_016831:4517850:453582345358234536101279Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transposase6e-0752.8
NC_012779:916000:923638923638923904267Edwardsiella ictaluri 93-146, complete genometransposase subfamily8e-0752.4
NC_021066:460292:494793494793495059267Raoultella ornithinolytica B6, complete genometransposase IS3/IS911 family protein9e-0752.4
NC_015663:1:116341163411900267Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-0651.6
NC_015663:1:227752277523041267Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-0651.6
NC_012917:2641000:264632926463292646613285Pectobacterium carotovorum subsp. carotovorum PC1, complete genometransposase IS3/IS911 family protein1e-0651.6
NC_015761:520858:533068533068533334267Salmonella bongori NCTC 12419, complete genometransposase2e-0651.2
NC_003197:2894344:290706629070662907332267Salmonella typhimurium LT2, complete genomeputative transposase2e-0651.2
NC_011083:2847318:288157228815722881838267Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transposase subfamily2e-0651.2
NC_016810:2871689:292964229296422929908267Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase2e-0651.2
NC_016856:2896630:292730129273012927567267Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transposase2e-0651.2
NC_016857:2871689:292964229296422929908267Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transposase2e-0651.2
NC_016860:2917910:293063229306322930898267Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase2e-0651.2
NC_016863:2844883:287555428755542875820267Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transposase2e-0651.2
NC_017046:2896651:292838329283832928649267Salmonella enterica subsp. enterica serovar Typhimurium str. 798transposase2e-0651.2
NC_011149:4677412:468962646896264689892267Salmonella enterica subsp. enterica serovar Agona str. SL483,transposase subfamily2e-0650.8
NC_016816:1912366:192076619207661920882117Pantoea ananatis LMG 5342, complete genomeintegrase catalytic subunit3e-0650.4
NC_010694:3178842:318715831871583187406249Erwinia tasmaniensis, complete genomeTransposase, probable fragment3e-0650.4