Pre_GI: BLASTP Hits

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Query: NC_017221:441948:445676 Bifidobacterium longum subsp. longum KACC 91563 chromosome,

Start: 445676, End: 446326, Length: 651

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010816:2252732:225578922557892256439651Bifidobacterium longum DJO10A, complete genomeOligoribonuclease4e-116416
NC_008578:1827605:185484318548431855652810Acidothermus cellulolyticus 11B, complete genomeExonuclease, RNase T and DNA polymerase III6e-52203
NC_008278:1876435:189109018910901891860771Frankia alni ACN14a, complete genomeOligoribonuclease1e-49196
NC_013235:1938889:195770319577031958341639Nakamurella multipartita DSM 44233, complete genomeExonuclease RNase T and DNA polymerase III5e-47187
NC_007164:622000:625885625885626517633Corynebacterium jeikeium K411, complete genomeputative oligoribonuclease6e-47187
NC_013093:1157476:117432711743271174953627Actinosynnema mirum DSM 43827, complete genomeExonuclease RNase T and DNA polymerase III1e-46186
NC_014643:1986440:199410819941081994701594Rothia dentocariosa ATCC 17931 chromosome, complete genomeoligoribonuclease8e-47186
NC_012704:1641684:166341416634141664082669Corynebacterium kroppenstedtii DSM 44385, complete genomeputative oligoribonuclease8e-46183
NC_019673:1275627:130059013005901301186597Saccharothrix espanaensis DSM 44229 complete genomeOligoribonuclease9e-45179
NC_009077:3851203:385376838537683854415648Mycobacterium sp. JLS, complete genomeExonuclease, RNase T and DNA polymerase III7e-43173
NC_017186:7822448:782712178271217827696576Amycolatopsis mediterranei S699 chromosome, complete genomeoligoribonuclease3e-40165
NC_014318:7821227:782707578270757827650576Amycolatopsis mediterranei U32 chromosome, complete genomeoligoribonuclease3e-40165
NC_016002:2453919:245391924539192454464546Pseudogulbenkiania sp. NH8B, complete genomeoligoribonuclease1e-31136
NC_009654:2958316:298244029824402982997558Marinomonas sp. MWYL1, complete genomeoligoribonuclease2e-31135
NC_015276:2804874:282282828228282823376549Marinomonas mediterranea MMB-1 chromosome, complete genomeOligoribonuclease2e-31135
NC_018868:3229381:323390032339003234448549Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeoligoribonuclease6e-31134
NC_016513:1185241:119921911992191199767549Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeoligoribonuclease1e-30133
NC_013416:875758:889738889738890286549Aggregatibacter actinomycetemcomitans D11S-1, complete genomeoligoribonuclease1e-30133
NC_009465:90000:125572125572126117546Candidatus Vesicomyosocius okutanii HA, complete genomeoligoribonuclease5e-29127
NC_020541:2264521:228866122886612289227567Rhodanobacter sp. 2APBS1, complete genome5' exoribonuclease)' target='_blank' title='Search database for similar gene annotations'>oligoribonuclease (3'->5' exoribonuclease)1e-28126
NC_012691:2614603:271925527192552719800546Tolumonas auensis DSM 9187, complete genomeExonuclease RNase T and DNA polymerase III1e-28126
NC_016632:120500:131043131043131588546Serratia symbiotica str. 'Cinara cedri' chromosome, completeoligoribonuclease3e-28125
NC_005061:65861:819328193282474543Candidatus Blochmannia floridanus, complete genomeoligoribonuclease4e-23108
NC_015696:47484:595195951960055537Francisella sp. TX077308 chromosome, complete genome3'-to-5' oligoribonuclease1e-22106
NC_020126:2405175:241216224121622412683522Myxococcus stipitatus DSM 14675, complete genomeoligoribonuclease1e-0756.2