Pre_GI Gene

Some Help

Host: NC_010816 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010816:2252732 Bifidobacterium longum DJO10A, complete genome

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22520612252735675Putative translation factorQuickGO ontologyBLASTP
225273222540151284UDP-N-acetylmuramyl pentapeptide phosphotransferaseUDP-N-acetylglucosamine-1-phosphate transferaseQuickGO ontologyBLASTP
225406822556211554IMP dehydrogenaseGMP reductaseQuickGO ontologyBLASTP
22557892256439651OligoribonucleaseQuickGO ontologyBLASTP
225648822579061419ATP-dependent exoDNAse exonuclease V alpha subunitQuickGO ontologyBLASTP
225799322615563564Restriction endonucleaseQuickGO ontologyBLASTP
22620462262465420Hypothetical protein for probable DNA repairQuickGO ontologyBLASTP
22624622262794333hypothetical proteinBLASTP
22655002265889390hypothetical protein
226597022677841815Prolyl-tRNA synthetaseQuickGO ontologyBLASTP
22682222268797576Single-stranded DNA-binding proteinQuickGO ontologyBLASTP
226888022710542175neutral endopeptidaseQuickGO ontologyBLASTP
22712312272211981hypothetical proteinBLASTP
22723572273139783methionine aminopeptidaseQuickGO ontologyBLASTP
227341322747051293Citrate synthaseQuickGO ontologyBLASTP