Pre_GI: BLASTP Hits

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Query: NC_017066:33268:47136 Rickettsia typhi str. TH1527 chromosome, complete genome

Start: 47136, End: 47423, Length: 288

Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. This organism causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. R. prowazekii, and genomic comparisons demonstrate colinearity and similarity to the genome of that organism except for two independent inversions near the origin and terminus. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017062:33268:471034710347390288Rickettsia typhi str. B9991CWPP chromosome, complete genometype IV secretion system protein VirB31e-49194
NC_006142:33268:471364713647423288Rickettsia typhi str. Wilmington, complete genomeprobable type IV secretory system protein VirB31e-49194
NC_017049:109000:111750111750112037288Rickettsia prowazekii str. Chernikova chromosome, complete genometype IV secretion system protein VirB36e-49192
NC_017050:110500:113549113549113836288Rickettsia prowazekii str. Katsinyian chromosome, complete genometype IV secretion system protein VirB36e-49192
NC_017051:109000:111753111753112040288Rickettsia prowazekii str. Dachau chromosome, complete genometype IV secretion system protein VirB36e-49192
NC_017056:110500:113559113559113846288Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genometype IV secretion system protein VirB36e-49192
NC_017057:110000:113676113676113963288Rickettsia prowazekii str. RpGvF24 chromosome, complete genometype IV secretion system protein VirB32e-48190
NC_017048:452000:455620455620455907288Rickettsia prowazekii str. GvV257 chromosome, complete genometype IV secretion system protein VirB32e-48190
NC_017028:180219:197765197765198052288Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completetype IV secretion system protein VirB39e-48188
NC_017044:130000:135017135017135304288Rickettsia parkeri str. Portsmouth chromosome, complete genometype IV secretion system protein VirB32e-47187
NC_009879:107890:111737111737112024288Rickettsia canadensis str. McKiel, complete genomeType IV secretory pathway, VirB3-like protein1e-45181
NC_016929:109500:112598112598112885288Rickettsia canadensis str. CA410 chromosome, complete genometype IV secretion system protein VirB35e-45179
NC_010793:794494:799272799272799559288Orientia tsutsugamushi str. Ikeda, complete genometype IV secretion system protein VirB35e-22103
NC_009488:1871912:187674818767481877035288Orientia tsutsugamushi str. Boryong, complete genometype IV secretion system protein VirB35e-22102
NC_007799:474931:481051481051481344294Ehrlichia chaffeensis str. Arkansas, complete genometype IV secretion system protein VirB32e-1994.4
NC_005295:873500:900728900728901021294Ehrlichia ruminantium str. Welgevonden, complete genometype IV secretion system protein VirB38e-1992.4
NC_006831:849500:875899875899876198300Ehrlichia ruminantium str. Gardel, complete genomehypothetical protein7e-1992.4
NC_006832:853500:880290880290880589300Ehrlichia ruminantium str. Welgevonden, complete genomehypothetical protein7e-1992.4
NC_007354:756500:781166781166781471306Ehrlichia canis str. Jake, complete genomeType IV secretory pathway, VirB3-like3e-1890.5
NC_007798:758873:773340773340773636297Neorickettsia sennetsu str. Miyayama, complete genometype IV secretion system protein VirB35e-1786.3
NC_015593:1587684:160490916049091605193285Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completetype IV secretory pathway VirB3 family protein5e-1063.2