Pre_GI: BLASTP Hits

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Query: NC_016944:859492:877147 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 877147, End: 881748, Length: 4602

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:338288:3576263576263622274602Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein03042
NC_012668:2744393:2779076277907627836774602Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein03042
NC_012578:818241:8375808375808421814602Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein03042
NC_002505:860789:8813908813908847283339Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeinner membrane protein, putative02219
NC_009457:351512:3725633725633754512889Vibrio cholerae O395 chromosome 2, complete sequenceinner membrane protein01904
NC_009457:351512:3708513708513725601710Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein01105
NC_002505:860789:8801288801288812671140Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein0727
NC_010995:323562:3550283550283563861359Cellvibrio japonicus Ueda107, complete genomecarbohydrate binding protein, putative, cbp6B5e-0758.2
NC_013508:1687432:1695682169568216969051224Edwardsiella tarda EIB202, complete genomehypothetical protein6e-0654.7