Pre_GI: BLASTP Hits

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Query: NC_016944:1621575:1639085 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1639085, End: 1641139, Length: 2055

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:2589951:2595114259511425972012088Pseudomonas putida KT2440, complete genomeDNA polymerase1e-148527
NC_009937:4122652:4127616412761641294451830Azorhizobium caulinodans ORS 571, complete genomeDNA polymerase4e-109395
NC_014834:3130715:3169352316935231714362085Rhodopseudomonas palustris DX-1 chromosome, complete genomeDNA-directed DNA polymerase8e-97355
NC_007484:580106:5975875975876002982712Nitrosococcus oceani ATCC 19707, complete genomeDNA polymerase A6e-1789.7
NC_015696:610000:6141616141616168512691Francisella sp. TX077308 chromosome, complete genomeDNA polymerase I9e-1789.4
NC_010410:3166279:3189431318943131922022772Acinetobacter baumannii AYE, complete genome 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease' target='_blank' title='Search database for similar gene annotations'>DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease2e-1584.7
NC_013939:1995546:1995546199554619979152370Deferribacter desulfuricans SSM1, complete genomeDNA polymerase I1e-1482
NC_016048:2678205:2678205267820526808592655Oscillibacter valericigenes Sjm18-20, complete genomeDNA polymerase I6e-1479.7
NC_018607:1251357:1272547127254712753242778Brachyspira pilosicoli B2904 chromosome, complete genomeDNA polymerase I8e-1479.3
NC_014010:1392536:1392536139253613954662931Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeDNA polymerase I1e-1379
NC_005085:786851:8025748025748053602787Chromobacterium violaceum ATCC 12472, complete genomeDNA-directed DNA polymerase I1e-1379
NC_018604:1489567:1511338151133815141152778Brachyspira pilosicoli WesB complete genomeDNA polymerase I2e-1378.6
NC_014330:2520906:2539845253984525426402796Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA polymerase I2e-1378.2
NC_008321:4631866:4655692465569246584602769Shewanella sp. MR-4, complete genomeDNA polymerase I5e-1377
NC_008577:4907497:4931315493131549340832769Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA polymerase I6e-1376.6
NC_014722:846084:8976038976039003862784Burkholderia rhizoxinica HKI 454, complete genomeDNA polymerase I3e-1274.3
NC_004842:1081271:1082130108213010847242595Anaplasma marginale str. St. Maries, complete genomeDNA polymerase I3e-1273.9
NC_012704:947409:9595609595609623372778Corynebacterium kroppenstedtii DSM 44385, complete genomeDNA polymerase I8e-1272.8
NC_008260:2992813:3005056300505630079262871Alcanivorax borkumensis SK2, complete genomeDNA polymerase I4e-1170.5
NC_003450:1395565:1413820141382014164622643Corynebacterium glutamicum ATCC 13032, complete genomeDNA polymerase I3e-1067.4
NC_016629:415711:4182324182324208802649Desulfovibrio africanus str. Walvis Bay chromosome, completeDNA polymerase I4e-1067.4
NC_009342:1538000:1557629155762915602712643Corynebacterium glutamicum R chromosome, complete genomeDNA polymerase I5e-1067
NC_013124:1107202:1123306112330611259662661Acidimicrobium ferrooxidans DSM 10331, complete genomeDNA polymerase I5e-1067
NC_008705:3201817:3199074319907432018362763Mycobacterium sp. KMS, complete genomeDNA polymerase I8e-1066.2
NC_010725:2589014:2608552260855226116953144Methylobacterium populi BJ001, complete genomeDNA polymerase I1e-0965.5
NC_007797:1451804:12212226832562Anaplasma phagocytophilum HZ, complete genomeDNA polymerase I4e-0963.9
NC_012997:59407:7455674556772822727Teredinibacter turnerae T7901, complete genomeDNA polymerase I4e-0963.9
NC_003366:2266757:2283149228314922857492601Clostridium perfringens str. 13, complete genomeDNA polymerase I5e-0963.5
NC_011661:906583:9081099081099106762568Dictyoglomus turgidum DSM 6724, complete genomeDNA polymerase I8e-0962.8
NC_008261:2481500:2496982249698224995822601Clostridium perfringens ATCC 13124, complete genomeDNA polymerase I9e-0962.8
NC_008262:2150944:2166242216624221688422601Clostridium perfringens SM101, complete genomeDNA polymerase I1e-0862.4
NC_007519:3391090:3409221340922134120162796Desulfovibrio alaskensis G20 chromosome, complete genomeDNA polymerase I1e-0862
NC_013510:3324978:3326383332638333291032721Thermomonospora curvata DSM 43183, complete genomeDNA polymerase I1e-0759.3