Pre_GI: BLASTP Hits

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Query: NC_016846:24500:35664 Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,

Start: 35664, End: 36926, Length: 1263

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009800:320115:3352873352873364951209Escherichia coli HS, complete genomeputative DNA Methylase family3e-38159
NC_015724:166246:1711841711841724341251Cupriavidus necator N-1 plasmid BB2p, complete sequenceDNA methylase family1e-31137
NC_009659:3384997:3394685339468533958961212Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein8e-2098.6
NC_014150:3139852:3156576315657631577931218Brachyspira murdochii DSM 12563 chromosome, complete genomeN-6 DNA methylase5e-1066.2
NC_017177:192933:194771194771195619849Clostridium difficile BI1, complete genomeN-6 DNA methylase4e-0963.2
NC_014374:193391:2507062507062521211416Acidilobus saccharovorans 345-15 chromosome, complete genomeSite specific DNA-methyltransferase2e-0757
NC_014206:411143:4160804160804175341455Geobacillus sp. C56-T3 chromosome, complete genomeN-6 DNA methylase2e-0653.9
NC_016593:416661:4210304210304224871458Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeN-6 DNA methylase2e-0653.9
NC_012470:1061392:1076596107659610782181623Streptococcus equi subsp. zooepidemicus, complete genometype II restriction enzyme and methylase2e-0653.9
NC_016047:2480921:2492305249230524951812877Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetype I restriction-modification system, M subunit3e-0653.5
NC_006510:372826:3771953771953786491455Geobacillus kaustophilus HTA426, complete genometype I restriction modification system M subunit (site-specific DNA-methyltransferase subunit)3e-0653.1
NC_015733:1179977:1195819119581911972911473Pseudomonas putida S16 chromosome, complete genomemodification methylase AccI3e-0653.1
NC_014448:414784:4238244238244266192796Mycoplasma hyorhinis HUB-1 chromosome, complete genomeType I restriction-modification system methyltransferase subunit6e-0652.4
NC_016620:781995:7940057940057957471743Bacteriovorax marinus SJ, complete genomeputative type I restriction enzyme modification protein6e-0652.4