Pre_GI: BLASTP Hits

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Query: NC_016830:1182765:1207930 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1207930, End: 1208844, Length: 915

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:1151143:117831611783161179230915Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative Sec protein secretion system, subunit SecF2e-140498
NC_007492:5214709:521629552162955217209915Pseudomonas fluorescens PfO-1, complete genomeprotein export protein SecF6e-133473
NC_012660:5571500:557158355715835572497915Pseudomonas fluorescens SBW25 chromosome, complete genomepreprotein translocase subunit SecF1e-131469
NC_018012:3401854:342196534219653422912948Thiocystis violascens DSM 198 chromosome, complete genomeprotein translocase subunit secF1e-68259
NC_015581:1133775:1133775113377511348211047Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeprotein-export membrane protein SecF6e-60231
NC_018697:1343756:134375613437561344691936Cycloclasticus sp. P1 chromosome, complete genomePreprotein translocase subunit SecF2e-59229
NC_009465:938378:938378938378939292915Candidatus Vesicomyosocius okutanii HA, complete genomepreprotein translocase SecF subunit4e-56218
NC_008610:1068429:107138710713871072313927Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),protein-export membrane protein SecF1e-54213
NC_008789:1837493:185138018513801852342963Halorhodospira halophila SL1, complete genomeprotein-export membrane protein SecF1e-52206
NC_008601:1151653:115507811550781156022945Francisella tularensis subsp. novicida U112, complete genomepreprotein translocase, subunit F, membrane protein6e-52204
NC_012559:978419:978419978419979399981Laribacter hongkongensis HLHK9, complete genomeSecF1e-45183
NC_017192:497950:517951517951518919969Arcobacter sp. L, complete genomepreprotein translocase subunit SecF1e-43177
NC_013939:106681:106681106681107580900Deferribacter desulfuricans SSM1, complete genomepreprotein translocase subunit F2e-41169
NC_015722:1050023:105002310500231050934912Candidatus Midichloria mitochondrii IricVA chromosome, completepreprotein translocase subunit SecF3e-41169
NC_007508:3034718:304807530480753049043969Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeprotein export protein SecF1e-38160
NC_017271:2789667:280419728041972805165969Xanthomonas campestris pv. raphani 756C chromosome, completeprotein-export membrane protein SecF1e-38160
NC_013520:718732:720003720003720896894Veillonella parvula DSM 2008, complete genomeprotein-export membrane protein SecF1e-38160
NC_015587:114684:114684114684115565882Hydrogenobaculum sp. SHO chromosome, complete genomeprotein-export membrane protein SecF6e-37154
NC_020411:114683:114683114683115564882Hydrogenobaculum sp. HO, complete genomeprotein-export membrane protein SecF6e-37154
NC_015557:114648:114648114648115529882Hydrogenobaculum sp. 3684 chromosome, complete genomeprotein-export membrane protein SecF6e-37154
NC_018664:1795223:181566518156651816531867Clostridium acidurici 9a chromosome, complete genomeprotein-export membrane protein SecF1e-35150
NC_011059:1:151901519016119930Prosthecochloris aestuarii DSM 271, complete genomeprotein-export membrane protein SecF2e-35149
NC_013517:2909798:291486929148692915795927Sebaldella termitidis ATCC 33386, complete genomeprotein-export membrane protein SecF2e-33143
NC_020409:512861:5278205278205288811062Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeProtein-export membrane protein SecF4e-33142
NC_013501:1691532:169509316950931696019927Rhodothermus marinus DSM 4252, complete genomeprotein-export membrane protein SecF1e-32140
NC_014355:3248386:325163932516393252556918Candidatus Nitrospira defluvii, complete genomeprotein-export membrane protein SecF1e-32140
NC_007799:81723:849428494285823882Ehrlichia chaffeensis str. Arkansas, complete genomeprotein-export membrane protein SecF9e-32137
NC_007333:430000:4310844310844338192736Thermobifida fusca YX, complete genomeSecD/SecF/SecDF export membrane protein2e-31136
NC_016024:156000:1578501578501591301281Candidatus Chloracidobacterium thermophilum B chromosome chromosomeprotein-export membrane protein SecF3e-31135
NC_003454:1346500:135842613584261359379954Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeProtein translocase subunit secF2e-30132
NC_012667:703852:728470728470729372903Vibrio cholerae MJ-1236 chromosome 2, complete genomeprotein-export membrane protein SecF1e-29130
NC_013894:1194458:119536711953671196248882Thermocrinis albus DSM 14484 chromosome, complete genomeprotein-export membrane protein SecF2e-29129
NC_014632:402500:414162414162415052891Ilyobacter polytropus DSM 2926 chromosome, complete genomeprotein translocase subunit secF3e-29129
NC_013192:1941002:194753019475301948501972Leptotrichia buccalis DSM 1135, complete genomeprotein-export membrane protein SecF3e-29129
NC_010382:3783879:3801685380168538039102226Lysinibacillus sphaericus C3-41, complete genomeprotein-export membrane protein2e-27123
NC_015496:2155816:2172082217208221750632982Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeprotein-export membrane protein SecD2e-25116
NC_010571:4483500:4505305450530545078542550Opitutus terrae PB90-1, complete genomeprotein-export membrane protein SecD6e-25115
NC_014041:4093190:4093190409319040961802991Zunongwangia profunda SM-A87 chromosome, complete genomebifunctional preprotein translocase subunit SecD/SecF3e-25115
NC_011146:603429:611304611304612245942Geobacter bemidjiensis Bem, complete genomeprotein-export membrane protein SecF1e-24113
NC_010546:4786000:480177948017794802705927Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceprotein export membrane protein6e-23108
NC_013062:627000:6720266720266749412916Flavobacteriaceae bacterium 3519-10, complete genomeProtein-export membrane protein secD/ Protein-export membrane protein secF1e-22107
NC_011725:4373721:4390032439003243922962265Bacillus cereus B4264 chromosome, complete genomebifunctional preprotein translocase subunit SecD/SecF3e-22106
NC_004722:4333643:4346797434679743490612265Bacillus cereus ATCC 14579, complete genomeProtein translocase subunit SecD / Protein translocase subunit SecF8e-22104
NC_014328:3682000:368741136874113688286876Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative protein-export membrane protein8e-21101
NC_006156:685344:694552694552695451900Borrelia garinii PBi chromosome linear, complete sequenceprotein-export membrane protein2e-2099.8
NC_015500:987641:1015053101505310163001248Treponema brennaborense DSM 12168 chromosome, complete genomeprotein-export membrane protein SecF7e-2098.2
NC_020054:2066510:2069969206996920730853117Fibrella aestuarina BUZ 2 drat genomeprotein-export membrane protein SecD1e-1997.4
NC_017243:517684:519159519159520082924Brachyspira intermedia PWS/A chromosome, complete genomepreprotein translocase1e-1790.9
NC_012225:1575432:159131815913181592241924Brachyspira hyodysenteriae WA1, complete genomepreprotein translocase1e-1790.9
NC_009455:273519:319927319927320832906Dehalococcoides sp. BAV1 chromosome, complete genomepreprotein translocase subunit SecF2e-1789.7
NC_013174:1459730:1462763146276314638631101Jonesia denitrificans DSM 20603, complete genomeprotein-export membrane protein SecF4e-1685.5
NC_017031:1261289:1283101128310112842221122Corynebacterium pseudotuberculosis P54B96 chromosome, completeProtein-export membrane protein secF2e-1273.2
NC_017301:1261167:1282980128298012841011122Corynebacterium pseudotuberculosis C231 chromosome, completeProtein-export membrane protein secF2e-1273.2
NC_017303:1261311:1283123128312312842441122Corynebacterium pseudotuberculosis I19 chromosome, complete genomeProtein-export membrane protein secF2e-1273.2
NC_017305:1258840:1280652128065212817731122Corynebacterium pseudotuberculosis PAT10 chromosome, completeProtein-export membrane protein secF2e-1273.2
NC_016932:1246235:1268031126803112691521122Corynebacterium pseudotuberculosis 316 chromosome, complete genomeprotein-export membrane protein secF3e-1272.8
NC_014329:1261480:1283292128329212844131122Corynebacterium pseudotuberculosis FRC41 chromosome, completeprotein-export membrane protein5e-1272
NC_016781:1261300:1283112128311212842331122Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeprotein-export membrane protein secF5e-1272
NC_017300:1258861:1280674128067412817951122Corynebacterium pseudotuberculosis 1002 chromosome, completeProtein-export membrane protein secF5e-1272
NC_016789:1334514:1407540140754014086521113Corynebacterium diphtheriae PW8 chromosome, complete genomepreprotein translocase subunit SecF5e-1272
NC_016801:1361597:1406860140686014079721113Corynebacterium diphtheriae C7 (beta) chromosome, complete genomepreprotein translocase subunit SecF5e-1272
NC_016788:1349500:1360442136044213615541113Corynebacterium diphtheriae HC04 chromosome, complete genomepreprotein translocase subunit SecF7e-1271.6
NC_016782:1359000:1363862136386213649741113Corynebacterium diphtheriae 241 chromosome, complete genomepreprotein translocase subunit SecF6e-1271.6
NC_016783:1374464:1386040138604013871521113Corynebacterium diphtheriae INCA 402 chromosome, complete genomepreprotein translocase subunit SecF6e-1271.6
NC_016786:1359064:1363832136383213649441113Corynebacterium diphtheriae HC01 chromosome, complete genomepreprotein translocase subunit SecF6e-1271.6
NC_016799:1343020:1417183141718314182951113Corynebacterium diphtheriae 31A chromosome, complete genomepreprotein translocase subunit SecF6e-1271.6
NC_016800:1378728:1390324139032413914361113Corynebacterium diphtheriae BH8 chromosome, complete genomepreprotein translocase subunit SecF6e-1271.6
NC_016802:1317365:1362652136265213637641113Corynebacterium diphtheriae HC02 chromosome, complete genomepreprotein translocase subunit SecF6e-1271.6
NC_002935:1378566:1389519138951913906311113Corynebacterium diphtheriae NCTC 13129, complete genomeprotein export protein SecF6e-1271.6
NC_016787:1350676:1356938135693813580501113Corynebacterium diphtheriae HC03 chromosome, complete genomepreprotein translocase subunit SecF6e-1271.6
NC_016790:1319060:1333006133300613341181113Corynebacterium diphtheriae VA01 chromosome, complete genomepreprotein translocase subunit SecF6e-1271.6
NC_016785:1321700:1343344134334413444561113Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomepreprotein translocase subunit SecF7e-1271.6