Pre_GI: BLASTP Hits

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Query: NC_016830:1182765:1195007 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1195007, End: 1195906, Length: 900

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015975:380500:391051391051391968918Lactobacillus ruminis ATCC 27782 chromosome, complete genomeSEFIR domain containing protein5e-24111
NC_002967:1844000:1850567185056718517631197Treponema denticola ATCC 35405, complete genomehypothetical protein1e-23110
NC_009483:2136424:2140986214098621425271542Geobacter uraniireducens Rf4 chromosome, complete genomeSEFIR domain-containing protein1e-23110
NC_019842:484933:5093985093985106331236Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,protein-transmembrane prediction1e-22107
NC_016835:128757:1346041346041360401437Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,SEFIR domain-containing protein8e-22104
NC_015690:1186545:1196281119628111976991419Paenibacillus mucilaginosus KNP414 chromosome, complete genomeSEFIR domain-containing protein2e-21102
NC_016803:2431672:2447230244723024487021473Desulfovibrio desulfuricans ND132 chromosome, complete genomeSEFIR domain-containing protein4e-2099
NC_008752:558828:5681165681165697771662Acidovorax avenae subsp. citrulli AAC00-1, complete genomeSEFIR domain protein2e-1996.7
NC_011094:1584038:159562315956231596573951Salmonella enterica subsp. enterica serovar Schwarzengrund strsefir domain-containing protein6e-1995.1
NC_013440:3813132:3824265382426538257341470Haliangium ochraceum DSM 14365, complete genomeSEFIR domain protein5e-1788.6
NC_014483:1604000:1617871161787116192111341Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein4e-1375.5
NC_013440:1317982:1322383132238313239661584Haliangium ochraceum DSM 14365, complete genomeSEFIR domain protein1e-1067.4
NC_005139:1784000:188743818874381887851414Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-0962.8
NC_007517:1998342:2006838200683820102873450Geobacter metallireducens GS-15, complete genomehypothetical protein3e-0859.7
NC_008321:2190000:219765221976522198305654Shewanella sp. MR-4, complete genomehypothetical protein7e-0651.6