Pre_GI: BLASTP Hits

Some Help

Query: NC_016776:246648:255060 Bacteroides fragilis 638R, complete genome

Start: 255060, End: 255440, Length: 381

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015571:1030527:105884810588481059225378Porphyromonas gingivalis TDC60, complete genomeconjugative transposon protein TraF2e-31134
NC_006347:112500:129915129915130247333Bacteroides fragilis YCH46, complete genomeTraF6e-23106
NC_015164:2961906:296995029699502970282333Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein6e-23106
NC_016610:1310275:134739813473981347730333Tannerella forsythia ATCC 43037 chromosome, complete genomeconjugative transposon protein TraF9e-23105
NC_016776:1609476:162437016243701624705336Bacteroides fragilis 638R, complete genomehypothetical protein5e-2199.8
NC_006347:1585191:159886515988651599200336Bacteroides fragilis YCH46, complete genomeconserved protein found in conjugate transposon TraF2e-2098.2
NC_004663:6223442:625195062519506252270321Bacteroides thetaiotaomicron VPI-5482, complete genomeconserved protein found in conjugate transposon2e-2097.8
NC_016776:5174606:519707451970745197397324Bacteroides fragilis 638R, complete genomeputative transmembrane conserved protein found in conjugate transposon8e-2095.5
NC_003228:2010643:205323820532382053561324Bacteroides fragilis NCTC 9343, complete genomeputative transmembrane conserved protein found in conjugate transposon9e-2095.5
NC_002950:1511955:155853415585341558869336Porphyromonas gingivalis W83, complete genomeconjugative transposon protein TraF1e-1995.1
NC_015177:1822000:183494918349491835278330Pedobacter saltans DSM 12145 chromosome, complete genomehypothetical protein1e-1995.1
NC_015571:2044000:207426220742622074597336Porphyromonas gingivalis TDC60, complete genomeconjugative transposon protein TraF3e-1994
NC_015277:4358000:437235343723534372685333Sphingobacterium sp. 21 chromosome, complete genomehypothetical protein8e-1992.4
NC_015177:1950461:195765019576501957982333Pedobacter saltans DSM 12145 chromosome, complete genomehypothetical protein1e-1892
NC_015501:1941851:196347919634791963805327Porphyromonas asaccharolytica DSM 20707 chromosome, completeconjugative transposon protein TraF1e-1788.6
NC_014371:889043:895908895908896243336Prevotella melaninogenica ATCC 25845 chromosome chromosome II,2e-1787.8
NC_015311:2489176:250965025096502509985336Prevotella denticola F0289 chromosome, complete genome3e-1787
NC_004663:2859158:287550528755052875840336Bacteroides thetaiotaomicron VPI-5482, complete genomeconserved protein found in conjugate transposon3e-1787
NC_009614:2034265:205243720524372052763327Bacteroides vulgatus ATCC 8482 chromosome, complete genomeconjugate transposon protein4e-1786.7
NC_015311:1827000:184970218497021850037336Prevotella denticola F0289 chromosome, complete genome7e-1785.9
NC_009441:5248791:526241852624185262732315Flavobacterium johnsoniae UW101 chromosome, complete genomehypothetical protein9e-1165.5
NC_015164:1260500:126586712658671266187321Bacteroides salanitronis DSM 18170 chromosome, complete genomeconjugate transposon protein3e-1063.9
NC_014041:3715000:372662837266283726942315Zunongwangia profunda SM-A87 chromosome, complete genomehypothetical protein3e-0960.5
NC_009441:4218434:423608042360804236391312Flavobacterium johnsoniae UW101 chromosome, complete genomehypothetical protein4e-0960.1
NC_019904:5207309:522115252211525221478327Echinicola vietnamensis DSM 17526 chromosome, complete genomehypothetical protein3e-0753.9
NC_013037:1072266:109074910907491091090342Dyadobacter fermentans DSM 18053, complete genomehypothetical protein7e-0752.8