Pre_GI: BLASTP Hits

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Query: NC_016582:2069677:2094112 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 2094112, End: 2095149, Length: 1038

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:7561923:7590412759041275914521041Streptomyces coelicolor A3(2), complete genomehypothetical protein5e-52205
NC_014623:464324:4674074674074684591053Stigmatella aurantiaca DW4/3-1 chromosome, complete genome3-oxoacyl-acp synthase III4e-51202
NC_008278:5012000:5041594504159450426371044Frankia alni ACN14a, complete genomePutative 3-oxoacyl-[acyl-carrier-protein] synthase.6e-38158
NC_007333:1411050:1432407143240714334411035Thermobifida fusca YX, complete genomeputative 3-oxoacyl-ACP synthase III8e-30131
NC_008711:3701635:3710417371041737114871071Arthrobacter aurescens TC1, complete genomeputative 3-oxoacyl-(acyl-carrier-protein) synthase III9e-1374.7
NC_007777:2459357:2462504246250424635441041Frankia sp. CcI3, complete genomeputative 3-oxoacyl-ACP synthase III1e-1170.5
NC_017295:3762622:377676737767673777744978Clostridium acetobutylicum EA 2018 chromosome, complete genome3-oxoacyl-ACP synthase3e-0963.2
NC_003030:3763054:377741537774153778392978Clostridium acetobutylicum ATCC 824, complete genome3-oxoacyl-(acyl carrier protein) synthase3e-0963.2
NC_015687:3766000:377899837789983779975978Clostridium acetobutylicum DSM 1731 chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] synthase III3e-0963.2
NC_010723:1133163:113901711390171139985969Clostridium botulinum E3 str. Alaska E43, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III8e-0961.6
NC_016610:1138995:116049911604991161494996Tannerella forsythia ATCC 43037 chromosome, complete genomebeta-ketoacyl-acyl-carrier-protein synthase III2e-0860.1
NC_009662:383381:387699387699388697999Nitratiruptor sp. SB155-2, complete genome3-oxoacyl-(acyl carrier protein) synthase III5e-0858.9
NC_010674:1170264:117516311751631176131969Clostridium botulinum B str. Eklund 17B, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III8e-0858.2
NC_020291:1266885:128989412898941290865972Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome3-oxoacyl-[acyl-carrier-protein] synthase 31e-0757.8
NC_014010:175500:177157177157178140984Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeprobable 3-oxoacyl-acyl-carrier-protein synthase iii1e-0757.8
NC_009617:1278000:128058212805821281553972Clostridium beijerinckii NCIMB 8052 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III4e-0756.2
NC_009615:4425500:444230144423014443299999Parabacteroides distasonis ATCC 8503 chromosome, complete genome3-oxoacyl-ACP synthase2e-0653.5
NC_014831:1140356:1156239115623911574951257Thermaerobacter marianensis DSM 12885 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase III7e-0652