Pre_GI: BLASTP Hits

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Query: NC_016582:11820671:11822577 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 11822577, End: 11824886, Length: 2310

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010995:948041:9480419480419504492409Cellvibrio japonicus Ueda107, complete genomehypothetical protein4e-160565
NC_013174:373726:3834893834893857232235Jonesia denitrificans DSM 20603, complete genomeprotein of unknown function DUF16801e-145517
NC_015966:521703:5442245442245461491926Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomehypothetical protein6e-122438
NC_016935:2918689:2918689291868929209382250Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein1e-112407
NC_015690:2369510:2370328237032823725772250Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-112407
NC_016641:2773757:2788251278825127905752325Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein9e-109395
NC_014479:3510972:3514154351415435156471494Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein1e-101371
NC_010688:2052619:2057861205786120602362376Xanthomonas campestris pv. campestris, complete genomePutative secreted protein7e-93342
NC_003919:2956404:2967983296798329703582376Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-91337
NC_007508:3065621:3088883308888330912582376Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative secreted protein4e-89329
NC_015057:361902:3815643815643839662403Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequenceprotein of unknown function DUF16808e-85315
NC_016791:1079322:1082621108262110854792859Clostridium sp. BNL1100 chromosome, complete genomehypothetical protein2e-80300
NC_011898:1512213:1517840151784015207072868Clostridium cellulolyticum H10, complete genomeprotein of unknown function DUF16801e-79298
NC_016582:11878078:1188415611884156118863572202Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-70268
NC_013929:1119384:1144373114437311467332361Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-67257
NC_016938:193000:2073252073252099762652Melissococcus plutonius DAT561 chromosome 1, complete genomehypothetical protein4e-67256
NC_014364:4488875:4522409452240945247032295Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF16802e-59230
NC_016935:2256000:2257232225723222591571926Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein8e-59229
NC_015690:1726000:1727052172705217289621911Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein1e-58228
NC_015428:2019500:2036734203673420391452412Lactobacillus buchneri NRRL B-30929 chromosome, complete genomehypothetical protein9e-55215
NC_013929:5097389:5098583509858351013932811Streptomyces scabiei 87.22 chromosome, complete genomeglycosylase3e-49197
NC_014833:2988814:2992274299227429940821809Ruminococcus albus 7 chromosome, complete genomehypothetical protein7e-48192
NC_011898:1218500:1237684123768412394771794Clostridium cellulolyticum H10, complete genomeprotein of unknown function DUF16805e-42173
NC_019960:1272956:1279899127989912818901992Prevotella dentalis DSM 3688 chromosome 1, complete sequencehypothetical protein7e-1583.2
NC_014484:1594396:1599307159930716012381932Spirochaeta thermophila DSM 6192 chromosome, complete genomeputative cytoplasmic protein2e-1171.6
NC_020210:1951746:1958990195899019609211932Geobacillus sp. GHH01, complete genomeAraN-like protein6e-1170.1
NC_013411:2767400:2767400276740027693221923Geobacillus sp. Y412MC61, complete genomeprotein of unknown function DUF16802e-0964.7
NC_014656:1365673:1379698137969813816741977Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein3e-0964.7
NC_009615:4031335:4039301403930140411541854Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein7e-0860.1