Pre_GI: BLASTP Hits

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Query: NC_016582:11672500:11684595 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 11684595, End: 11685488, Length: 894

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009142:5459819:546703154670315467918888Saccharopolyspora erythraea NRRL 2338, complete genomehydrolase, alpha/beta fold family1e-151535
NC_014623:7482229:753616275361627536950789Stigmatella aurantiaca DW4/3-1 chromosome, complete genomealpha/beta fold family hydrolase9e-1994.4
NC_008563:2041345:205086320508632051642780Escherichia coli APEC O1, complete genomehypothetical protein5e-1272
NC_007969:1095438:110535211053521106152801Psychrobacter cryohalolentis K5, complete genomealpha/beta hydrolase fold5e-1065.1
NC_008711:3454359:348560334856033486469867Arthrobacter aurescens TC1, complete genomehydrolase, alpha/beta fold family domain protein3e-0756.2
NC_010338:4148667:4168341416834141695311191Caulobacter sp. K31, complete genome3-oxoadipate enol-lactonase5e-0755.5
NC_018531:3625810:365688936568893657710822Arthrobacter sp. Rue61a chromosome, complete genometropinesterase8e-0754.7
NC_007434:2449721:247487024748702475754885Burkholderia pseudomallei 1710b chromosome I, complete sequencehydrolase, alpha/beta fold family1e-0653.9
NC_003909:4614789:462421246242124625024813Bacillus cereus ATCC 10987, complete genomehydrolase, alpha/beta fold family2e-0653.1
NC_016771:4569941:457988945798894580701813Bacillus cereus NC7401, complete genomealpha/beta fold family hydrolase2e-0653.1
NC_011658:4616933:462612446261244626936813Bacillus cereus AH187 chromosome, complete genomealpha/beta fold family hydrolase2e-0653.1
NC_013406:4023367:402435340243534025231879Paenibacillus sp. Y412MC10 chromosome, complete genomealpha/beta hydrolase fold protein3e-0652.8