Pre_GI: BLASTP Hits

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Query: NC_016582:10159486:10195300 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10195300, End: 10197003, Length: 1704

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007912:2958000:297593529759352976546612Saccharophagus degradans 2-40, complete genomeresponse regulator receiver domain protein (CheY-like)3e-1893.6
NC_014960:1735786:176392617639261764708783Anaerolinea thermophila UNI-1, complete genomehypothetical protein6e-1376.3
NC_013166:961431:978287978287978805519Kangiella koreensis DSM 16069, complete genomeacetyltransferase (isoleucine patch superfamily)-like protein3e-1067
NC_019745:3217552:323317432331743233890717Gloeocapsa sp. PCC 7428, complete genomehypothetical protein5e-0963.2
NC_016610:1138995:113928111392811139784504Tannerella forsythia ATCC 43037 chromosome, complete genometransferase hexapeptide repeat protein2e-0861.2
NC_014334:1954333:196901019690101969708699Lactobacillus casei str. Zhang chromosome, complete genomeputative acetyl transferase3e-0860.8
NC_009925:2728203:274092127409212741448528Acaryochloris marina MBIC11017, complete genometransferase hexapeptide repeat-containing protein, putative5e-0859.7
NC_007514:1936812:194656919465691947132564Chlorobium chlorochromatii CaD3, complete genomeAcetyltransferase (isoleucine patch superfamily)-like1e-0758.9
NC_014033:1691822:171191117119111712501591Prevotella ruminicola 23 chromosome, complete genomeputative O-acetyltransferase1e-0758.9
NC_007604:1586243:161628416162841616958675Synechococcus elongatus PCC 7942, complete genomehypothetical protein1e-0758.5
NC_006576:12230:172541725417928675Synechococcus elongatus PCC 6301, complete genomehypothetical protein1e-0758.5
NC_014841:248487:260239260239260805567Pantoea sp. At-9b plasmid pPAT9B04, complete sequencenodulation protein L2e-0757.8
NC_014171:5068500:508469250846925085408717Bacillus thuringiensis BMB171 chromosome, complete genomedTDP-glucose 4,6-dehydratase5e-0756.6
NC_008639:2968000:300413330041333004687555Chlorobium phaeobacteroides DSM 266, complete genometransferase hexapeptide repeat containing protein5e-0756.6
NC_013922:1911338:192801919280191928729711Natrialba magadii ATCC 43099 chromosome, complete genomeAcetyltransferase (isoleucine patch superfamily)-like protein7e-0756.2
NC_009615:21500:289692896929568600Parabacteroides distasonis ATCC 8503 chromosome, complete genomeacetyltransferase8e-0755.8
NC_014640:76992:912389123891795558Achromobacter xylosoxidans A8 chromosome, complete genometransferase hexapeptide family protein 11e-0655.5
NC_009615:1469642:149217814921781492804627Parabacteroides distasonis ATCC 8503 chromosome, complete genomeacetyl transferase2e-0654.7
NC_010999:2155714:216599221659922166657666Lactobacillus casei, complete genomePutative acetyl transferase3e-0653.9
NC_006513:3486558:349450434945043495079576Azoarcus sp. EbN1, complete genomehypothetical protein3e-0653.9
NC_009615:1627961:163558516355851636265681Parabacteroides distasonis ATCC 8503 chromosome, complete genomeacetyltransferase3e-0653.9
NC_011060:514874:525193525193525756564Pelodictyon phaeoclathratiforme BU-1, complete genometransferase hexapeptide repeat containing protein4e-0653.5
NC_012914:6583000:659553365955336596528996Paenibacillus sp. JDR-2, complete genometransferase hexapeptide repeat containing protein5e-0653.1
NC_015737:664999:677805677805678395591Clostridium sp. SY8519, complete genomehypothetical protein5e-0653.1
NC_011753:206178:219925219925220509585Vibrio splendidus LGP32 chromosome 1, complete genomeputative acyl transferase7e-0652.8